RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 AGAP6Q5VW22 663 aa15.87■□□□□ 0.13
CCDC12-208ENST00000603885 NET1Q7Z628 596 aaPredicted RBP15.87■□□□□ 0.13
CCDC12-208ENST00000603885 RANBP3LQ86VV4 465 aaPredicted RBP15.87■□□□□ 0.13
CCDC12-208ENST00000603885 KDM8Q8N371 416 aa15.87■□□□□ 0.13
CCDC12-208ENST00000603885 RNF217Q8TC41 542 aa15.87■□□□□ 0.13
CCDC12-208ENST00000603885 TAAR8Q969N4 342 aa15.87■□□□□ 0.13
CCDC12-208ENST00000603885 OXGR1Q96P68 337 aa15.87■□□□□ 0.13
CCDC12-208ENST00000603885 ALKBH3Q96Q83 286 aaPredicted RBP15.87■□□□□ 0.13
CCDC12-208ENST00000603885 PRR14Q9BWN1 585 aa15.87■□□□□ 0.13
CCDC12-208ENST00000603885 RCE1Q9Y256 329 aa15.87■□□□□ 0.13
CCDC12-208ENST00000603885 B3GALT5Q9Y2C3 310 aa15.87■□□□□ 0.13
CCDC12-208ENST00000603885 IGKV1D-42A0A075B6H8 117 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 A0A0B4J2E0 115 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 A0A1B0GX12 115 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 E7EQL1 145 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 M0R082 166 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 CD8AP01732 235 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 CLDN17P56750 224 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 LGALS3BPQ08380 585 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 C1DQ13901 141 aaKnown RBP15.86■□□□□ 0.13
CCDC12-208ENST00000603885 VEZF1Q14119 521 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 MFSD13AQ14CX5 517 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 OR1Q1Q15612 314 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 CLEC12BQ2HXU8 276 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 HIKESHIQ53FT3 197 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 SLC30A8Q8IWU4 369 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 SMYD1Q8NB12 490 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 ZNF417Q8TAU3 575 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 BOD1Q96IK1 185 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 ZNF587Q96SQ5 575 aaPredicted RBP15.86■□□□□ 0.13
CCDC12-208ENST00000603885 EPYCQ99645 322 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 DHRS9Q9BPW9 319 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 TMEM120AQ9BXJ8 343 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 LINC00470Q9BZP3 86 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 FKRPQ9H9S5 495 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 OBP2BQ9NPH6 170 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 MRGBPQ9NV56 204 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 KLHL14Q9P2G3 628 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 SEC14L4Q9UDX3 406 aa15.86■□□□□ 0.13
CCDC12-208ENST00000603885 A0A087WUJ7 227 aa15.85■□□□□ 0.13
CCDC12-208ENST00000603885 LGI1O95970 557 aa15.85■□□□□ 0.13
CCDC12-208ENST00000603885 TROVE2P10155 538 aaKnown RBP eCLIP15.85■□□□□ 0.13
CCDC12-208ENST00000603885 GRPRP30550 384 aa15.85■□□□□ 0.13
CCDC12-208ENST00000603885 TTKP33981 857 aa15.85■□□□□ 0.13
CCDC12-208ENST00000603885 IL1RL1Q01638 556 aa15.85■□□□□ 0.13
CCDC12-208ENST00000603885 SWT1Q5T5J6 900 aaKnown RBP15.85■□□□□ 0.13
CCDC12-208ENST00000603885 HMBOX1Q6NT76 420 aa15.85■□□□□ 0.13
CCDC12-208ENST00000603885 H1FNTQ75WM6 255 aaPredicted RBP15.85■□□□□ 0.13
CCDC12-208ENST00000603885 FBXL14Q8N1E6 418 aa15.85■□□□□ 0.13
CCDC12-208ENST00000603885 OR1K1Q8NGR3 316 aa15.85■□□□□ 0.13
CCDC12-208ENST00000603885 OR6S1Q8NH40 331 aa15.85■□□□□ 0.13
CCDC12-208ENST00000603885 HS6ST2Q96MM7 605 aa15.85■□□□□ 0.13
CCDC12-208ENST00000603885 KAT8Q9H7Z6 458 aaKnown RBP15.85■□□□□ 0.13
CCDC12-208ENST00000603885 BARX1Q9HBU1 254 aaPredicted RBP15.85■□□□□ 0.13
CCDC12-208ENST00000603885 B3GAT1Q9P2W7 334 aa15.85■□□□□ 0.13
CCDC12-208ENST00000603885 CSPG4Q6UVK1 2322 aa15.85■□□□□ 0.13
CCDC12-208ENST00000603885 HEATR1Q9H583 2144 aaKnown RBP15.85■□□□□ 0.13
CCDC12-208ENST00000603885 M0QX08 132 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 AKAP8O43823 692 aaKnown RBP15.84■□□□□ 0.13
CCDC12-208ENST00000603885 TPST2O60704 377 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 FMO6PO60774 539 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 SLC43A1O75387 559 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 UPK3AO75631 287 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 OPN1SWP03999 348 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 C8BP07358 591 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 PTNP21246 168 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 CBLP22681 906 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 PAX7P23759 505 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 SH3BGRP55822 239 aaPredicted RBP15.84■□□□□ 0.13
CCDC12-208ENST00000603885 TNK1Q13470 666 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 TRMT5Q32P41 509 aaKnown RBP15.84■□□□□ 0.13
CCDC12-208ENST00000603885 TBRG1Q3YBR2 411 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 ZNF544Q6NX49 715 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 B3GLCTQ6Y288 498 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 PATL1Q86TB9 770 aaKnown RBP15.84■□□□□ 0.13
CCDC12-208ENST00000603885 MUC15Q8N387 334 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 ADPRHL1Q8NDY3 354 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 ZNF317Q96PQ6 595 aaPredicted RBP15.84■□□□□ 0.13
CCDC12-208ENST00000603885 MCHR1Q99705 422 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 ARHGDIGQ99819 225 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 WFDC6Q9BQY6 131 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 ASPNQ9BXN1 380 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 CBLN4Q9NTU7 201 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 CORINQ9Y5Q5 1042 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 ATP23Q9Y6H3 246 aa15.84■□□□□ 0.13
CCDC12-208ENST00000603885 LOC102725191A0A1B0GVB3 256 aa15.83■□□□□ 0.12
CCDC12-208ENST00000603885 M0R3H8 397 aa15.83■□□□□ 0.12
CCDC12-208ENST00000603885 ZNF432O94892 652 aa15.83■□□□□ 0.12
CCDC12-208ENST00000603885 IGHV4-39P01824 125 aa15.83■□□□□ 0.12
CCDC12-208ENST00000603885 NQO1P15559 274 aaKnown RBP15.83■□□□□ 0.12
CCDC12-208ENST00000603885 PCGF2P35227 344 aa15.83■□□□□ 0.12
CCDC12-208ENST00000603885 FABP6P51161 128 aa15.83■□□□□ 0.12
CCDC12-208ENST00000603885 CDH12P55289 794 aa15.83■□□□□ 0.12
CCDC12-208ENST00000603885 UBE2NP61088 152 aaKnown RBP15.83■□□□□ 0.12
CCDC12-208ENST00000603885 ROR2Q01974 943 aaKnown RBP15.83■□□□□ 0.12
CCDC12-208ENST00000603885 CYLC2Q14093 348 aaPredicted RBP15.83■□□□□ 0.12
CCDC12-208ENST00000603885 NRF1Q16656 503 aa15.83■□□□□ 0.12
CCDC12-208ENST00000603885 DUSP7Q16829 419 aa15.83■□□□□ 0.12
CCDC12-208ENST00000603885 INTS11Q5TA45 600 aaKnown RBP15.83■□□□□ 0.12
CCDC12-208ENST00000603885 ZNF613Q6PF04 617 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms