RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 PNMTP11086 282 aa15.68■□□□□ 0.1
PPFIA3-207ENST00000602716 IFNGR2P38484 337 aa15.68■□□□□ 0.1
PPFIA3-207ENST00000602716 CCL11P51671 97 aa15.68■□□□□ 0.1
PPFIA3-207ENST00000602716 RRADP55042 308 aa15.68■□□□□ 0.1
PPFIA3-207ENST00000602716 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.68■□□□□ 0.1
PPFIA3-207ENST00000602716 OR1C1Q15619 314 aa15.68■□□□□ 0.1
PPFIA3-207ENST00000602716 CLEC12AQ5QGZ9 265 aa15.68■□□□□ 0.1
PPFIA3-207ENST00000602716 GRINAQ7Z429 371 aa15.68■□□□□ 0.1
PPFIA3-207ENST00000602716 ZNF248Q8NDW4 579 aa15.68■□□□□ 0.1
PPFIA3-207ENST00000602716 FDCSPQ8NFU4 85 aa15.68■□□□□ 0.1
PPFIA3-207ENST00000602716 C1GALT1C1Q96EU7 318 aa15.68■□□□□ 0.1
PPFIA3-207ENST00000602716 UBL7Q96S82 380 aaPredicted RBP15.68■□□□□ 0.1
PPFIA3-207ENST00000602716 HHATLQ9HCP6 504 aa15.68■□□□□ 0.1
PPFIA3-207ENST00000602716 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 PNMA8CA0A1B0GUJ8 204 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 UNC119BA6NIH7 251 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 EFNA2O43921 213 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 CH25HO95992 272 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 P04436 131 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 SAGP10523 405 aaPredicted RBP15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 POLR2HP52434 150 aaKnown RBP15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 LTBQ06643 244 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 THSD4Q6ZMP0 1018 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 RASSF6Q6ZTQ3 369 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 TMPRSS11FQ6ZWK6 438 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 SNIP1Q8TAD8 396 aaKnown RBP15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 CCNL2Q96S94 520 aaPredicted RBP15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 UTP23Q9BRU9 249 aaKnown RBP15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 SDHAF3Q9NRP4 125 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 DNAJC27Q9NZQ0 273 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 CAB39Q9Y376 341 aaPredicted RBP15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 A0A075B6Q4 140 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 SLC25A12O75746 678 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 GSTM3P21266 225 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 TPTEP56180 551 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 SOX8P57073 446 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 SPANXN2Q5MJ10 180 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 OR4Q3Q8NH05 313 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 OR51A7Q8NH64 312 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 FANK1Q8TC84 345 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 ST8SIA1Q92185 356 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 TMEM80Q96HE8 168 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 SAMD8Q96LT4 415 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 TMEM43Q9BTV4 400 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 PTDSS2Q9BVG9 487 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 NUAK2Q9H093 628 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 CDH10Q9Y6N8 788 aa15.67■□□□□ 0.1
PPFIA3-207ENST00000602716 APC2O95996 2303 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 LOC110117498-PIK3R3F6TDL0 507 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 ETV2O00321 342 aaPredicted RBP15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 RFPL3SP0C7P2 107 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 CXCR1P25024 350 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 MSX1P28360 303 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 RFC3P40938 356 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 ZNF41P51814 821 aaPredicted RBP15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 C19orf57Q0VDD7 668 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 COX10Q12887 443 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 KRR1Q13601 381 aaKnown RBP15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 TIGD3Q6B0B8 471 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 ACSM5Q6NUN0 579 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 GPALPP1Q8IXQ4 340 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 SGTBQ96EQ0 304 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 TMEM41AQ96HV5 264 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 AGAP4Q96P64 663 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 SDHCQ99643 169 aaPredicted RBP15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 RACGAP1Q9H0H5 632 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 OR52D1Q9H346 318 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 TMEM185BQ9H7F4 350 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 C12orf10Q9HB07 376 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 MCCC2Q9HCC0 563 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 KLHL1Q9NR64 748 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 SEC14L4Q9UDX3 406 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 CLEC2DQ9UHP7 191 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 SIGLEC7Q9Y286 467 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 TMEM5Q9Y2B1 443 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 RPH3AQ9Y2J0 694 aaPredicted RBP15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 KCNMB2Q9Y691 235 aa15.66■□□□□ 0.1
PPFIA3-207ENST00000602716 RPS5P46782 204 aaKnown RBP15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 DLX5P56178 289 aa15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 ZNF91Q05481 1191 aa15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 DBPQ10586 325 aaPredicted RBP15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 CRTC2Q53ET0 693 aaPredicted RBP15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 RNLSQ5VYX0 342 aa15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 CASP12Q6UXS9 341 aa15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 GDPD3Q7L5L3 318 aa15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 MDS2Q8NDY4 140 aa15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 OR8J1Q8NGP2 316 aa15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 OR1J4Q8NGS1 313 aa15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 TAAR8Q969N4 342 aa15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 KRCC1Q9NPI7 259 aaPredicted RBP15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 ABI3Q9P2A4 366 aa15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 CRNNQ9UBG3 495 aaPredicted RBP15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 RPL36Q9Y3U8 105 aaKnown RBP15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 CTDSP2O14595 271 aa15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 NPIPB7O75200 414 aa15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 OR7A10O76100 309 aa15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 OPN1LWP04000 364 aa15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 SHC1P29353 583 aa15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 CASRP41180 1078 aa15.65■□□□□ 0.1
PPFIA3-207ENST00000602716 FOXO1Q12778 655 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms