RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 TRUB1Q8WWH5 349 aaKnown RBP16.67■□□□□ 0.26
SSBP4-212ENST00000601919 CPNE4Q96A23 557 aaPredicted RBP16.67■□□□□ 0.26
SSBP4-212ENST00000601919 SARAFQ96BY9 339 aa16.67■□□□□ 0.26
SSBP4-212ENST00000601919 PLEKHA8Q96JA3 519 aa16.67■□□□□ 0.26
SSBP4-212ENST00000601919 MUS81Q96NY9 551 aa16.67■□□□□ 0.26
SSBP4-212ENST00000601919 SLC25A18Q9H1K4 315 aa16.67■□□□□ 0.26
SSBP4-212ENST00000601919 INIPQ9NRY2 104 aa16.67■□□□□ 0.26
SSBP4-212ENST00000601919 TAS2R5Q9NYW4 299 aa16.67■□□□□ 0.26
SSBP4-212ENST00000601919 IL20RAQ9UHF4 553 aa16.67■□□□□ 0.26
SSBP4-212ENST00000601919 NPIPA1Q9UND3 350 aa16.67■□□□□ 0.26
SSBP4-212ENST00000601919 LIPGQ9Y5X9 500 aa16.67■□□□□ 0.26
SSBP4-212ENST00000601919 MED12Q93074 2177 aa16.67■□□□□ 0.26
SSBP4-212ENST00000601919 DNAJC13O75165 2243 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 ZNF407Q9C0G0 2248 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 A0A1W2PNV4 684 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 ERVH48-1M5A8F1 160 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 BHLHE40O14503 412 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 IMPA2O14732 288 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 VAMP5O95183 116 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 IFNGP01579 166 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 GNAO1P09471 354 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 CPN1P15169 458 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 EIF1AXP47813 144 aaKnown RBP16.66■□□□□ 0.26
SSBP4-212ENST00000601919 AGFG1P52594 562 aaKnown RBP16.66■□□□□ 0.26
SSBP4-212ENST00000601919 CTXN1P60606 82 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 IL5RAQ01344 420 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 CTU2Q2VPK5 515 aaKnown RBP16.66■□□□□ 0.26
SSBP4-212ENST00000601919 GXYLT1Q4G148 440 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 KRTCAP3Q53RY4 240 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 GPR139Q6DWJ6 353 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 TMEM225Q6GV28 225 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 PXKQ7Z7A4 578 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 LSRQ86X29 649 aaPredicted RBP16.66■□□□□ 0.26
SSBP4-212ENST00000601919 PM20D2Q8IYS1 436 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 MARVELD2Q8N4S9 558 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 IQCF1Q8N6M8 205 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 ANKK1Q8NFD2 765 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 OR10D3Q8NH80 312 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 MOSPD2Q8NHP6 518 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 ADGRG7Q96K78 797 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 TSPAN10Q9H1Z9 355 aaPredicted RBP16.66■□□□□ 0.26
SSBP4-212ENST00000601919 FANCFQ9NPI8 374 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 TVP23BQ9NYZ1 205 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 RASD1Q9Y272 281 aa16.66■□□□□ 0.26
SSBP4-212ENST00000601919 A0A1W2PRG6 482 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 OR14I1A6ND48 311 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 AQP7P3A6NL99 342 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 MCIDASD6RGH6 385 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 C11orf98E9PRG8 122 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 ARPC3O15145 178 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 SYNGR4O95473 234 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 PPP1R3DO95685 299 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 CLIC3O95833 236 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 ENPP1P22413 925 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 SUCLG1P53597 346 aaKnown RBP16.65■□□□□ 0.26
SSBP4-212ENST00000601919 CLDN15P56746 228 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 H3F3AP84243 136 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 C19orf57Q0VDD7 668 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 KLRB1Q12918 225 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 SNAPC1Q16533 368 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 EMC4Q5J8M3 183 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 ACSM5Q6NUN0 579 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 C19orf48Q6RUI8 117 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 PTCHD4Q6ZW05 846 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 TMEM99Q8N816 258 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 LRRC75AQ8NAA5 344 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 OR8J1Q8NGP2 316 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 OR4Q3Q8NH05 313 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 ERMAPQ96PL5 475 aaPredicted RBP16.65■□□□□ 0.26
SSBP4-212ENST00000601919 TIMP4Q99727 224 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 KATNB1Q9BVA0 655 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 POLDIP3Q9BY77 421 aaKnown RBP16.65■□□□□ 0.26
SSBP4-212ENST00000601919 NRIP3Q9NQ35 241 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 PLSCR2Q9NRY7 297 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 LUZP4Q9P127 313 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 GRHPRQ9UBQ7 328 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 NOX1Q9Y5S8 564 aa16.65■□□□□ 0.26
SSBP4-212ENST00000601919 LOC102725191A0A1B0GVB3 256 aa16.64■□□□□ 0.25
SSBP4-212ENST00000601919 NPIPB13A6NJU9 1138 aa16.64■□□□□ 0.25
SSBP4-212ENST00000601919 RIIAD1A6NNX1 92 aa16.64■□□□□ 0.25
SSBP4-212ENST00000601919 NPIPB4C9JG80 1138 aa16.64■□□□□ 0.25
SSBP4-212ENST00000601919 MS4A18H0YCH9 400 aa16.64■□□□□ 0.25
SSBP4-212ENST00000601919 M0R3G1 203 aa16.64■□□□□ 0.25
SSBP4-212ENST00000601919 CXCL13O43927 109 aa16.64■□□□□ 0.25
SSBP4-212ENST00000601919 PCYT1AP49585 367 aa16.64■□□□□ 0.25
SSBP4-212ENST00000601919 DAP3P51398 398 aaKnown RBP16.64■□□□□ 0.25
SSBP4-212ENST00000601919 SRYQ05066 204 aa16.64■□□□□ 0.25
SSBP4-212ENST00000601919 PDK3Q15120 406 aa16.64■□□□□ 0.25
SSBP4-212ENST00000601919 MS4A18Q3C1V0 323 aa16.64■□□□□ 0.25
SSBP4-212ENST00000601919 UEVLDQ8IX04 471 aa16.64■□□□□ 0.25
SSBP4-212ENST00000601919 GHDCQ8N2G8 530 aa16.64■□□□□ 0.25
SSBP4-212ENST00000601919 EXD3Q8N9H8 876 aa16.64■□□□□ 0.25
SSBP4-212ENST00000601919 GPR137Q96N19 417 aa16.64■□□□□ 0.25
SSBP4-212ENST00000601919 OXGR1Q96P68 337 aa16.64■□□□□ 0.25
SSBP4-212ENST00000601919 ENKD1Q9H0I2 346 aa16.64■□□□□ 0.25
SSBP4-212ENST00000601919 SPRR3Q9UBC9 169 aa16.64■□□□□ 0.25
SSBP4-212ENST00000601919 KLHL21Q9UJP4 597 aa16.64■□□□□ 0.25
SSBP4-212ENST00000601919 MCTS1Q9ULC4 181 aaKnown RBP16.64■□□□□ 0.25
SSBP4-212ENST00000601919 IER3IP1Q9Y5U9 82 aa16.64■□□□□ 0.25
SSBP4-212ENST00000601919 IGHMP01871 453 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms