RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 TRMT61AQ96FX7 289 aaKnown RBP11.56□□□□□ -0.56
H3F3B-213ENST00000593254 BOD1Q96IK1 185 aa11.56□□□□□ -0.56
H3F3B-213ENST00000593254 KCNK17Q96T54 332 aa11.56□□□□□ -0.56
H3F3B-213ENST00000593254 CPPED1Q9BRF8 314 aaPredicted RBP11.56□□□□□ -0.56
H3F3B-213ENST00000593254 SLC17A5Q9NRA2 495 aa11.56□□□□□ -0.56
H3F3B-213ENST00000593254 FAIMQ9NVQ4 179 aa11.56□□□□□ -0.56
H3F3B-213ENST00000593254 RPS6KB2Q9UBS0 482 aa11.56□□□□□ -0.56
H3F3B-213ENST00000593254 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.56□□□□□ -0.56
H3F3B-213ENST00000593254 LEF1Q9UJU2 399 aaPredicted RBP11.56□□□□□ -0.56
H3F3B-213ENST00000593254 RASD1Q9Y272 281 aa11.56□□□□□ -0.56
H3F3B-213ENST00000593254 AMDHD2Q9Y303 409 aa11.56□□□□□ -0.56
H3F3B-213ENST00000593254 TENM1Q9UKZ4 2725 aa11.56□□□□□ -0.56
H3F3B-213ENST00000593254 EDF1O60869 148 aaKnown RBP11.55□□□□□ -0.56
H3F3B-213ENST00000593254 PNMTP11086 282 aa11.55□□□□□ -0.56
H3F3B-213ENST00000593254 SLC6A2P23975 617 aa11.55□□□□□ -0.56
H3F3B-213ENST00000593254 RPS5P46782 204 aaKnown RBP11.55□□□□□ -0.56
H3F3B-213ENST00000593254 SPOCK1Q08629 439 aa11.55□□□□□ -0.56
H3F3B-213ENST00000593254 RUNDC3AQ59EK9 446 aa11.55□□□□□ -0.56
H3F3B-213ENST00000593254 C5orf46Q6UWT4 87 aa11.55□□□□□ -0.56
H3F3B-213ENST00000593254 ABHD12BQ7Z5M8 362 aaPredicted RBP11.55□□□□□ -0.56
H3F3B-213ENST00000593254 DHDDSQ86SQ9 333 aa11.55□□□□□ -0.56
H3F3B-213ENST00000593254 EPHX4Q8IUS5 362 aa11.55□□□□□ -0.56
H3F3B-213ENST00000593254 DPP10Q8N608 796 aa11.55□□□□□ -0.56
H3F3B-213ENST00000593254 HIPK4Q8NE63 616 aa11.55□□□□□ -0.56
H3F3B-213ENST00000593254 DNAJA4Q8WW22 397 aaPredicted RBP11.55□□□□□ -0.56
H3F3B-213ENST00000593254 KCTD12Q96CX2 325 aaKnown RBP11.55□□□□□ -0.56
H3F3B-213ENST00000593254 KTI12Q96EK9 354 aaPredicted RBP11.55□□□□□ -0.56
H3F3B-213ENST00000593254 THOC1Q96FV9 657 aaKnown RBP11.55□□□□□ -0.56
H3F3B-213ENST00000593254 ZNF607Q96SK3 696 aa11.55□□□□□ -0.56
H3F3B-213ENST00000593254 ALG2Q9H553 416 aa11.55□□□□□ -0.56
H3F3B-213ENST00000593254 TESQ9UGI8 421 aaKnown RBP11.55□□□□□ -0.56
H3F3B-213ENST00000593254 IGKV1D-42A0A075B6H8 117 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 PRORSD1PA6NEY8 169 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 OR6C65A6NJZ3 312 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 E7EQL1 145 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 M0R1B8 84 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 OR2T1O43869 369 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 SERPINB7O75635 380 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 SASH3O75995 380 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 IGHV4-39P01824 125 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 AQP1P29972 269 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 SELENOPP49908 381 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 PCBP3P57721 371 aaKnown RBP11.54□□□□□ -0.56
H3F3B-213ENST00000593254 GABPB1Q06547 395 aaPredicted RBP11.54□□□□□ -0.56
H3F3B-213ENST00000593254 ALG10BQ5I7T1 473 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 FAM69AQ5T7M9 428 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 FAM91A1Q658Y4 838 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 ULK3Q6PHR2 472 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 SLC22A25Q6T423 547 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 B3GLCTQ6Y288 498 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 RETREG3Q86VR2 466 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 PTOV1Q86YD1 416 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 BHLHE22Q8NFJ8 381 aaPredicted RBP11.54□□□□□ -0.56
H3F3B-213ENST00000593254 TSPEARQ8WU66 669 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 SLC38A4Q969I6 547 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 TAAR8Q969N4 342 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 SLC25A36Q96CQ1 311 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 ANKRD27Q96NW4 1050 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 DHRS9Q9BPW9 319 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 SIKE1Q9BRV8 207 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 PRR14Q9BWN1 585 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 C1QTNF6Q9BXI9 259 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 NPHS2Q9NP85 383 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 B3GAT1Q9P2W7 334 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 SEC14L4Q9UDX3 406 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 CDC42EP3Q9UKI2 254 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 TRIM33Q9UPN9 1127 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 ANGPT4Q9Y264 503 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 NDUFAF1Q9Y375 327 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 MALRD1Q5VYJ5 2156 aa11.54□□□□□ -0.56
H3F3B-213ENST00000593254 A0A0B4J2E0 115 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 A0A1B0GX12 115 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 ZNF587BE7ETH6 402 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 ANGPT2O15123 496 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 WIPF1O43516 503 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 TPST2O60704 377 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 NDUFS7O75251 213 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 KRT33AO76009 404 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 ZNF432O94892 652 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 MFN2O95140 757 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 ZNF43P17038 809 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 CDH2P19022 906 aaPredicted RBP11.53□□□□□ -0.56
H3F3B-213ENST00000593254 GTF2E2P29084 291 aaKnown RBP11.53□□□□□ -0.56
H3F3B-213ENST00000593254 TTKP33981 857 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 ACVR1BP36896 505 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 RGS8P57771 180 aaPredicted RBP11.53□□□□□ -0.56
H3F3B-213ENST00000593254 PRPS1P60891 318 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 NCALDP61601 193 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 LGALS3BPQ08380 585 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 RBBP4Q09028 425 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 HIKESHIQ53FT3 197 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 C6orf52Q5T4I8 152 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 AGAP6Q5VW22 663 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 C11orf71Q6IPW1 123 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 NIPAL3Q6P499 406 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 LINGO2Q7L985 606 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 ARMC8Q8IUR7 673 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 DEPDC4Q8N2C3 294 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 KDM8Q8N371 416 aa11.53□□□□□ -0.56
H3F3B-213ENST00000593254 C11orf65Q8NCR3 313 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms