RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 TSPAN19P0C672 248 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 AHCYP23526 432 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 UQCRC1P31930 480 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 AQP2P41181 271 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 CA7P43166 264 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 IL1RL1Q01638 556 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 RPL18Q07020 188 aaKnown RBP13.55□□□□□ -0.24
ATG4D-211ENST00000589753 PUDPQ08623 228 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 COX10Q12887 443 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 FHL1Q13642 323 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 RNPS1Q15287 305 aaKnown RBP13.55□□□□□ -0.24
ATG4D-211ENST00000589753 MS4A18Q3C1V0 323 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 GTF2IRD2BQ6EKJ0 949 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 CD300LDQ6UXZ3 194 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 B3GNT6Q6ZMB0 384 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 ZBTB49Q6ZSB9 765 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 RASSF6Q6ZTQ3 369 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 GPAT4Q86UL3 456 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 GTF2IRD2Q86UP8 949 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 MCEMP1Q8IX19 187 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 CBR4Q8N4T8 237 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 TM9SF2Q99805 663 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 RBM4BQ9BQ04 359 aaKnown RBP13.55□□□□□ -0.24
ATG4D-211ENST00000589753 RBM4Q9BWF3 364 aaKnown RBP13.55□□□□□ -0.24
ATG4D-211ENST00000589753 SF3B5Q9BWJ5 86 aaKnown RBP13.55□□□□□ -0.24
ATG4D-211ENST00000589753 MCCC2Q9HCC0 563 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 PAPOLBQ9NRJ5 636 aaKnown RBP13.55□□□□□ -0.24
ATG4D-211ENST00000589753 KLHL13Q9P2N7 655 aa13.55□□□□□ -0.24
ATG4D-211ENST00000589753 SPENQ96T58 3664 aaKnown RBP13.54□□□□□ -0.24
ATG4D-211ENST00000589753 KIAA1549Q9HCM3 1950 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 A0A1W2PNV4 684 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 MBD3L4A6NDZ8 208 aaPredicted RBP13.54□□□□□ -0.24
ATG4D-211ENST00000589753 MBD3L3A6NE82 208 aaPredicted RBP13.54□□□□□ -0.24
ATG4D-211ENST00000589753 MBD3L5A6NJ08 208 aaPredicted RBP13.54□□□□□ -0.24
ATG4D-211ENST00000589753 C11orf98E9PRG8 122 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 SOCS2O14508 198 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 EI24O14681 340 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 RNF13O43567 381 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 RCBTB2O95199 551 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 HPRP00739 348 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 STSP08842 583 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 PEX2P28328 305 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 PRPS1P60891 318 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 PPP2R2BQ00005 443 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 RASGEF1BQ0VAM2 473 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 ZP4Q12836 540 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 DAG1Q14118 895 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 PDK3Q15120 406 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 ALG10Q5BKT4 473 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 LPCAT4Q643R3 524 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 KDM4DQ6B0I6 523 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 SMARCD3Q6STE5 483 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 KLHL17Q6TDP4 642 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 ZNF620Q6ZNG0 422 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 KDM8Q8N371 416 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 RPRMLQ8N4K4 120 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 C9orf106Q8NAJ2 232 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 MOSPD2Q8NHP6 518 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 MBD3L2Q8NHZ7 208 aaPredicted RBP13.54□□□□□ -0.24
ATG4D-211ENST00000589753 FANK1Q8TC84 345 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 MAGEE2Q8TD90 523 aaPredicted RBP13.54□□□□□ -0.24
ATG4D-211ENST00000589753 ABHD3Q8WU67 409 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 OXGR1Q96P68 337 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 TTYH2Q9BSA4 534 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 NDEL1Q9GZM8 345 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 RNF122Q9H9V4 155 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 FANCFQ9NPI8 374 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 KRT84Q9NSB2 600 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 USE1Q9NZ43 259 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 KLHL9Q9P2J3 617 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 POFUT2Q9Y2G5 429 aa13.54□□□□□ -0.24
ATG4D-211ENST00000589753 LOC102725191A0A1B0GVB3 256 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 ZNF716A6NP11 495 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 E9PLN8 166 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 NDUFB2O95178 105 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 PLGP00747 810 aaPredicted RBP13.53□□□□□ -0.24
ATG4D-211ENST00000589753 GNLYP22749 145 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 IGFBP5P24593 272 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 TIMP3P35625 211 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 ALDH3A2P51648 485 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 SLC16A1P53985 500 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 C1DQ13901 141 aaKnown RBP13.53□□□□□ -0.24
ATG4D-211ENST00000589753 SLC17A1Q14916 467 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 POU4F3Q15319 338 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 LRRC36Q1X8D7 754 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 OGFRL1Q5TC84 451 aaPredicted RBP13.53□□□□□ -0.24
ATG4D-211ENST00000589753 OR2A2Q6IF42 318 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 RPL13AP3Q6NVV1 102 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 SEM1Q6ZVN7 128 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 PXKQ7Z7A4 578 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 KIF18BQ86Y91 864 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 UEVLDQ8IX04 471 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 CLDN22Q8N7P3 220 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 ANKK1Q8NFD2 765 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 OR9K2Q8NGE7 335 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 SLC29A1Q99808 456 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 VKORC1Q9BQB6 163 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 OR52D1Q9H346 318 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 EGLN3Q9H6Z9 239 aa13.53□□□□□ -0.24
ATG4D-211ENST00000589753 INIPQ9NRY2 104 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms