RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 A0A0U1RQS6 177 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 TMEM72A0PK05 275 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 MT-ND4LP03901 98 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 TYRP1P17643 537 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 HIST1H1TP22492 207 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 SMUG1Q53HV7 270 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 OR1J2Q8NGS2 313 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 ISG20Q96AZ6 181 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 ALG12Q9BV10 488 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 CPEB1Q9BZB8 566 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 CXorf36Q9H7Y0 433 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 SLC25A37Q9NYZ2 338 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 M0QYG6 137 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 BRINP1O60477 761 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 MMP2P08253 660 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 CPN1P15169 458 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 POU3F3P20264 500 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 CD70P32970 193 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 SEMA3BQ13214 749 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 SLC35D3Q5M8T2 416 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 SLC16A12Q6ZSM3 486 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 DVL3Q92997 716 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 SENP5Q96HI0 755 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 GPR62Q9BZJ7 368 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 PATZ1Q9HBE1 687 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 EXO1Q9UQ84 846 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 ANKRD12Q6UB98 2062 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 RBM39Q14498 530 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 HSF5Q4G112 596 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 PRICKLE2Q7Z3G6 844 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 RNF32Q9H0A6 362 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 LPLP06858 475 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 RAB4AP20338 218 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 NFYBP25208 207 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 TACR3P29371 465 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 POLR2HP52434 150 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 IAH1Q2TAA2 248 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 SLC22A6Q4U2R8 563 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 WBP2NLQ6ICG8 309 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 WDR92Q96MX6 357 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 SMG9Q9H0W8 520 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 UBQLN3Q9H347 655 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 FBRSQ9HAH7 460 aa13.57□□□□□ -0.24
SMARCA4-214ENST00000589677 NPIPA5A0A0B4J1W7 369 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 ZNF587BE7ETH6 402 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 NPIPA7E9PJI5 369 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 JTBO76095 146 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 NPIPA8P0DM63 369 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 EPHA5P54756 1037 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 GPR85P60893 370 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 Q6ZTK2 550 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 YKT6O15498 198 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 SLC16A7O60669 478 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 TMEM127O75204 238 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 PTAFRP25105 342 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 CALCRP30988 508 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 HOXC13P31276 330 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 PRLHRP49683 370 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 FABP5Q01469 135 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 CD300CQ08708 224 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 CRMP1Q14194 572 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 C2orf27AQ580R0 203 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 CD300LGQ6UXG3 332 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 MRPL10Q7Z7H8 261 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 ADGRE4PQ86SQ3 457 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 RELL2Q8NC24 303 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 TTC9Q92623 222 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 TAS2R5Q9NYW4 299 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 PPT2Q9UMR5 302 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 NAV1Q8NEY1 1877 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 A0A1W2PPV4 95 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 C19orf57Q0VDD7 668 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 MRPL2Q5T653 305 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 GKN2Q86XP6 184 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 SLC6A17Q9H1V8 727 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 ZNF160Q9HCG1 818 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 RAB22AQ9UL26 194 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 GPR34Q9UPC5 381 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 OR5H14A6NHG9 310 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 EIF4EP06730 217 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 CASRP41180 1078 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 DLX2Q07687 328 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 ZNF239Q16600 458 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 PRAMEF8Q5VWM4 474 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 PRAMEF7Q5VXH5 474 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 TMEM88Q6PEY1 159 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 CHST14Q8NCH0 376 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 KCNG3Q8TAE7 436 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 CPNE4Q96A23 557 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 ATF6BQ99941 703 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 OPA3Q9H6K4 179 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 WDR76Q9H967 626 aa13.56□□□□□ -0.24
SMARCA4-214ENST00000589677 UMAD1C9J7I0 102 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 AQP8O94778 261 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 TXNDC12O95881 172 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 F10P00742 488 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 ZNF888P0CJ79 500 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 OR13C7P0DN81 318 aa13.55□□□□□ -0.24
SMARCA4-214ENST00000589677 CD80P33681 288 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms