RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ASAH2BP0C7U1 165 aa17.44■□□□□ 0.38
CIRBP-220ENST00000588917 FCGR1AP12314 374 aa17.44■□□□□ 0.38
CIRBP-220ENST00000588917 CBLP22681 906 aa17.44■□□□□ 0.38
CIRBP-220ENST00000588917 SLC9A3P48764 834 aa17.44■□□□□ 0.38
CIRBP-220ENST00000588917 KPNB1Q14974 876 aaKnown RBP17.44■□□□□ 0.38
CIRBP-220ENST00000588917 TBPL2Q6SJ96 375 aa17.44■□□□□ 0.38
CIRBP-220ENST00000588917 GCNT2Q8N0V5 402 aa17.44■□□□□ 0.38
CIRBP-220ENST00000588917 CNEP1R1Q8N9A8 125 aa17.44■□□□□ 0.38
CIRBP-220ENST00000588917 OR4K5Q8NGD3 323 aa17.44■□□□□ 0.38
CIRBP-220ENST00000588917 OR6K3Q8NGY3 331 aa17.44■□□□□ 0.38
CIRBP-220ENST00000588917 ZNF417Q8TAU3 575 aa17.44■□□□□ 0.38
CIRBP-220ENST00000588917 ABHD3Q8WU67 409 aa17.44■□□□□ 0.38
CIRBP-220ENST00000588917 SLCO4A1Q96BD0 722 aa17.44■□□□□ 0.38
CIRBP-220ENST00000588917 ZNF587Q96SQ5 575 aaPredicted RBP17.44■□□□□ 0.38
CIRBP-220ENST00000588917 SAMHD1Q9Y3Z3 626 aaKnown RBP17.44■□□□□ 0.38
CIRBP-220ENST00000588917 LYVE1Q9Y5Y7 322 aa17.44■□□□□ 0.38
CIRBP-220ENST00000588917 DOPEY1Q5JWR5 2465 aa17.44■□□□□ 0.38
CIRBP-220ENST00000588917 MED12Q93074 2177 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 TRBV4-1A0A0J9YWV2 114 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 ZNF716A6NP11 495 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 CLOCKO15516 846 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 OR10H3O60404 316 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 ZG16O60844 167 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 SAGP10523 405 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-220ENST00000588917 ZNF43P17038 809 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 PTNP21246 168 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 FASP25445 335 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 KIR2DL2P43627 348 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-220ENST00000588917 LIMS1P48059 325 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 ERFP50548 548 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 ZP4Q12836 540 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 SLC17A1Q14916 467 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 POU4F3Q15319 338 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 GUSBP1Q15486 140 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 SLC25A35Q3KQZ1 300 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 NCCRP1Q6ZVX7 275 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-220ENST00000588917 GALNT5Q7Z7M9 940 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 GPAT4Q86UL3 456 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 CCDC71Q8IV32 467 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-220ENST00000588917 TUSC5Q8IXB3 177 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 NAXEQ8NCW5 288 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 LRRC46Q96FV0 321 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 FUZQ9BT04 418 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 BDH2Q9BUT1 245 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 FANCFQ9NPI8 374 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 PLSCR4Q9NRQ2 329 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 C20orf141Q9NUB4 165 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 HIVEP3Q5T1R4 2406 aa17.43■□□□□ 0.38
CIRBP-220ENST00000588917 EFCAB9A8MZ26 197 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 LRRN3E7EW58 273 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 MS4A18H0YCH9 400 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 PLPP3O14495 311 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 CCNB2O95067 398 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 ADORA3P0DMS8 318 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 FUT4P22083 530 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 DNAJA1P31689 397 aaKnown RBP17.42■□□□□ 0.38
CIRBP-220ENST00000588917 P2RY4P51582 365 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 IL1RL1Q01638 556 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 PUDPQ08623 228 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 FOXF2Q12947 444 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 C1DQ13901 141 aaKnown RBP17.42■□□□□ 0.38
CIRBP-220ENST00000588917 MICAQ29983 383 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 EXOC3L2Q2M3D2 409 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 MS4A18Q3C1V0 323 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 SLC46A3Q7Z3Q1 461 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 NANOGNBQ7Z5D8 188 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 PXKQ7Z7A4 578 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 OAFQ86UD1 273 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 STK32CQ86UX6 486 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 NDEL1Q9GZM8 345 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 DENND2DQ9H6A0 471 aaPredicted RBP17.42■□□□□ 0.38
CIRBP-220ENST00000588917 KCNJ16Q9NPI9 418 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 CLEC4AQ9UMR7 237 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 NOX1Q9Y5S8 564 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 ITPR2Q14571 2701 aa17.42■□□□□ 0.38
CIRBP-220ENST00000588917 ERICH4A6NGS2 130 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 ZNF814B7Z6K7 855 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 BLOC1S5-TXNDC5H3BN57 136 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 E2F6O75461 281 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 TNFSF13O75888 250 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 CLDN14O95500 239 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 CD8BP10966 210 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 BMP5P22003 454 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 AHCYP23526 432 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 AGTR1P30556 359 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 SEC23BQ15437 767 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 C1orf94Q6P1W5 598 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 CREB3L2Q70SY1 520 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 UEVLDQ8IX04 471 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 LRRC17Q8N6Y2 441 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 OR9K2Q8NGE7 335 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 OR4C15Q8NGM1 316 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 GNPDA2Q8TDQ7 276 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 ITLN2Q8WWU7 325 aaPredicted RBP17.41■□□□□ 0.38
CIRBP-220ENST00000588917 STARD4Q96DR4 205 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 NRBF2Q96F24 287 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 PROCRQ9UNN8 238 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 NOSIPQ9Y314 301 aaKnown RBP17.41■□□□□ 0.38
CIRBP-220ENST00000588917 U3KQV3 271 aa17.41■□□□□ 0.38
CIRBP-220ENST00000588917 PHF3Q92576 2039 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms