RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 FZD7O75084 574 aa12.52□□□□□ -0.41
SDF2-202ENST00000585428 KRT75O95678 551 aa12.52□□□□□ -0.41
SDF2-202ENST00000585428 CELA3BP08861 270 aa12.52□□□□□ -0.41
SDF2-202ENST00000585428 NPR2P20594 1047 aa12.52□□□□□ -0.41
SDF2-202ENST00000585428 CHN2P52757 468 aa12.52□□□□□ -0.41
SDF2-202ENST00000585428 SH3BGRP55822 239 aaPredicted RBP12.52□□□□□ -0.41
SDF2-202ENST00000585428 COPZ1P61923 177 aa12.52□□□□□ -0.41
SDF2-202ENST00000585428 ARF1P84077 181 aaKnown RBP12.52□□□□□ -0.41
SDF2-202ENST00000585428 ROR2Q01974 943 aaKnown RBP12.52□□□□□ -0.41
SDF2-202ENST00000585428 EGR4Q05215 589 aa12.52□□□□□ -0.41
SDF2-202ENST00000585428 MPP2Q14168 576 aa12.52□□□□□ -0.41
SDF2-202ENST00000585428 LIN52Q52LA3 116 aa12.52□□□□□ -0.41
SDF2-202ENST00000585428 MYPOPQ86VE0 399 aaPredicted RBP12.52□□□□□ -0.41
SDF2-202ENST00000585428 KIRREL3Q8IZU9 778 aa12.52□□□□□ -0.41
SDF2-202ENST00000585428 CADM2Q8N3J6 435 aa12.52□□□□□ -0.41
SDF2-202ENST00000585428 LINC01356Q8N9X3 169 aa12.52□□□□□ -0.41
SDF2-202ENST00000585428 PNPT1Q8TCS8 783 aaKnown RBP12.52□□□□□ -0.41
SDF2-202ENST00000585428 SLC38A5Q8WUX1 472 aa12.52□□□□□ -0.41
SDF2-202ENST00000585428 ZNF837Q96EG3 531 aaPredicted RBP12.52□□□□□ -0.41
SDF2-202ENST00000585428 ALKBH3Q96Q83 286 aaPredicted RBP12.52□□□□□ -0.41
SDF2-202ENST00000585428 PTDSS2Q9BVG9 487 aa12.52□□□□□ -0.41
SDF2-202ENST00000585428 SSU72Q9NP77 194 aaKnown RBP12.52□□□□□ -0.41
SDF2-202ENST00000585428 ZNF503-AS2A6NEH8 195 aa12.51□□□□□ -0.41
SDF2-202ENST00000585428 hCG_2039718K7EN88 272 aa12.51□□□□□ -0.41
SDF2-202ENST00000585428 TCF21O43680 179 aa12.51□□□□□ -0.41
SDF2-202ENST00000585428 ZCCHC18P0CG32 403 aa12.51□□□□□ -0.41
SDF2-202ENST00000585428 VSNL1P62760 191 aa12.51□□□□□ -0.41
SDF2-202ENST00000585428 POU3F1Q03052 451 aaPredicted RBP12.51□□□□□ -0.41
SDF2-202ENST00000585428 STX3Q13277 289 aa12.51□□□□□ -0.41
SDF2-202ENST00000585428 RNF220Q5VTB9 566 aa12.51□□□□□ -0.41
SDF2-202ENST00000585428 PRAMEF8Q5VWM4 474 aa12.51□□□□□ -0.41
SDF2-202ENST00000585428 PRAMEF7Q5VXH5 474 aa12.51□□□□□ -0.41
SDF2-202ENST00000585428 IL17RDQ8NFM7 739 aa12.51□□□□□ -0.41
SDF2-202ENST00000585428 UBASH3BQ8TF42 649 aa12.51□□□□□ -0.41
SDF2-202ENST00000585428 AENQ8WTP8 325 aaKnown RBP12.51□□□□□ -0.41
SDF2-202ENST00000585428 ANKRD27Q96NW4 1050 aa12.51□□□□□ -0.41
SDF2-202ENST00000585428 OXGR1Q96P68 337 aa12.51□□□□□ -0.41
SDF2-202ENST00000585428 SPATA9Q9BWV2 254 aa12.51□□□□□ -0.41
SDF2-202ENST00000585428 GPR35Q9HC97 309 aa12.51□□□□□ -0.41
SDF2-202ENST00000585428 CALML5Q9NZT1 146 aa12.51□□□□□ -0.41
SDF2-202ENST00000585428 B3GAT1Q9P2W7 334 aa12.51□□□□□ -0.41
SDF2-202ENST00000585428 ZNF232Q9UNY5 417 aa12.51□□□□□ -0.41
SDF2-202ENST00000585428 RCE1Q9Y256 329 aa12.51□□□□□ -0.41
SDF2-202ENST00000585428 ZNF443Q9Y2A4 671 aaPredicted RBP12.51□□□□□ -0.41
SDF2-202ENST00000585428 IGHV2OR16-5A0A0B4J2B6 119 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 A0A0G2JPF8 293 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 LOC102725191A0A1B0GVB3 256 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 HNRNPCL2B2RXH8 293 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 HNRNPCL3B7ZW38 293 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 SDHDO14521 159 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 RFXANKO14593 260 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 TM9SF1O15321 606 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 HNRNPCL1O60812 293 aaKnown RBP12.5□□□□□ -0.41
SDF2-202ENST00000585428 HNRNPCL4P0DMR1 293 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 PNMTP11086 282 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 ETFAP13804 333 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 ZNF43P17038 809 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 ARR3P36575 388 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 CRISP3P54108 245 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 CDH15P55291 814 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 CLDN17P56750 224 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 LARS2Q15031 903 aaKnown RBP12.5□□□□□ -0.41
SDF2-202ENST00000585428 UGT2A3Q6UWM9 527 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 SPATA21Q7Z572 469 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 SERPINA11Q86U17 422 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 CCDC36Q8IYA8 594 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 SVOPLQ8N434 492 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 SLC25A36Q96CQ1 311 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 KTI12Q96EK9 354 aaPredicted RBP12.5□□□□□ -0.41
SDF2-202ENST00000585428 RSPO3Q9BXY4 272 aaPredicted RBP12.5□□□□□ -0.41
SDF2-202ENST00000585428 B3GNT2Q9NY97 397 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 P2RX2Q9UBL9 471 aa12.5□□□□□ -0.41
SDF2-202ENST00000585428 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.5□□□□□ -0.419e-12■■■■□ 24.7
SDF2-202ENST00000585428 SH3PXD2BA1X283 911 aa12.49□□□□□ -0.41
SDF2-202ENST00000585428 IL6P05231 212 aa12.49□□□□□ -0.41
SDF2-202ENST00000585428 ERCC1P07992 297 aaPredicted RBP12.49□□□□□ -0.41
SDF2-202ENST00000585428 ADRA2AP08913 450 aa12.49□□□□□ -0.41
SDF2-202ENST00000585428 NCF2P19878 526 aaPredicted RBP12.49□□□□□ -0.41
SDF2-202ENST00000585428 BGNP21810 368 aa12.49□□□□□ -0.41
SDF2-202ENST00000585428 NR4A1P22736 598 aa12.49□□□□□ -0.41
SDF2-202ENST00000585428 APEX1P27695 318 aaKnown RBP12.49□□□□□ -0.41
SDF2-202ENST00000585428 CRATP43155 626 aa12.49□□□□□ -0.41
SDF2-202ENST00000585428 RPS5P46782 204 aaKnown RBP12.49□□□□□ -0.41
SDF2-202ENST00000585428 EVX1P49640 407 aa12.49□□□□□ -0.41
SDF2-202ENST00000585428 TRIP10Q15642 601 aa12.49□□□□□ -0.41
SDF2-202ENST00000585428 ADRM1Q16186 407 aa12.49□□□□□ -0.41
SDF2-202ENST00000585428 NHLRC1Q6VVB1 395 aa12.49□□□□□ -0.41
SDF2-202ENST00000585428 GLB1L3Q8NCI6 653 aaPredicted RBP12.49□□□□□ -0.41
SDF2-202ENST00000585428 CKAP2Q8WWK9 683 aa12.49□□□□□ -0.41
SDF2-202ENST00000585428 SLC35B4Q969S0 331 aa12.49□□□□□ -0.41
SDF2-202ENST00000585428 ZNF75AQ96N20 296 aa12.49□□□□□ -0.41
SDF2-202ENST00000585428 SNX18Q96RF0 628 aa12.49□□□□□ -0.41
SDF2-202ENST00000585428 WDR55Q9H6Y2 383 aaPredicted RBP12.49□□□□□ -0.41
SDF2-202ENST00000585428 TPT1P8Q9HAU6 139 aa12.49□□□□□ -0.41
SDF2-202ENST00000585428 CRLF2Q9HC73 371 aa12.49□□□□□ -0.41
SDF2-202ENST00000585428 SEC14L4Q9UDX3 406 aa12.49□□□□□ -0.41
SDF2-202ENST00000585428 IFT52Q9Y366 437 aa12.49□□□□□ -0.41
SDF2-202ENST00000585428 PCDHB14Q9Y5E9 798 aa12.49□□□□□ -0.41
SDF2-202ENST00000585428 LYNX1G3V0Z9 82 aa12.48□□□□□ -0.41
SDF2-202ENST00000585428 SLC43A1O75387 559 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms