RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 OR13C3Q8NGS6 347 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 KCNG3Q8TAE7 436 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 SMIM4Q8WVI0 70 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 MRGPRX4Q96LA9 322 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 SBF1O95248 1867 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 BCAT2O15382 392 aaPredicted RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 FRS3O43559 492 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 ZNF780AO75290 641 aaPredicted RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 LIMS3P0CW19 117 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 LIMS4P0CW20 117 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 SPI1P17947 270 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 CD1CP29017 333 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 TACR3P29371 465 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 KIR2DL1P43626 348 aaPredicted RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 DHPSP49366 369 aaPredicted RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 GSK3AP49840 483 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 NR0B1P51843 470 aaKnown RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 LBX1P52954 281 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 TAS2R46P59540 309 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 RPS27AP62979 156 aaKnown RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 UBA52P62987 128 aaKnown RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 ERVK-25P63136 954 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 DLX2Q07687 328 aaPredicted RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 DOC2BQ14184 412 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 EIF2B1Q14232 305 aaKnown RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 GGTLC2Q14390 218 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 MED25Q71SY5 747 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 UBE3DQ7Z6J8 389 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 UBALD2Q8IYN6 164 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 BCORP1Q8N888 145 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 SDR9C7Q8NEX9 313 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 OR56B1Q8NGI3 324 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 SYT3Q9BQG1 590 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 NEURL2Q9BR09 285 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 FAM117AQ9C073 453 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 IRF2BPLQ9H1B7 796 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 WSB2Q9NYS7 404 aaPredicted RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 LRIT1Q9P2V4 623 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 MGAT4CQ9UBM8 478 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 TMED7-TICAM2A0A0A6YYA0 188 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 LOC100289279A0A1B0GTE1 492 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 A0A1B0GVT2 93 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 E9PI62 339 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 ZNF43P17038 809 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 SRMP19623 302 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 UQCRC1P31930 480 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 RBMXP38159 391 aaKnown RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 PRICKLE4Q2TBC4 344 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 CDONQ4KMG0 1287 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 ARTNQ5T4W7 220 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 ABHD12BQ7Z5M8 362 aaPredicted RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 PDZD9Q8IXQ8 264 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 SYNPRQ8TBG9 265 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 IP6K3Q96PC2 410 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 PHB2Q99623 299 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 ATG5Q9H1Y0 275 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 TXNIPQ9H3M7 391 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 TM7SF3Q9NS93 570 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 ALKBH4Q9NXW9 302 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 CLEC2DQ9UHP7 191 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 TMED7Q9Y3B3 224 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 BORCS7-ASMTA0A0B4J1R7 106 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 F5H5P2 479 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 GNB5O14775 395 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 STATHP02808 62 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 RFX2P48378 723 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 UBE2IP63279 158 aaKnown RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 LTBQ06643 244 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 EIF3IQ13347 325 aaKnown RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 TCTN1Q2MV58 587 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 LYSMD4Q5XG99 296 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 H1FNTQ75WM6 255 aaPredicted RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 ZNF283Q8N7M2 679 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 ZSCAN1Q8NBB4 408 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 GPX7Q96SL4 187 aaPredicted RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 CSF3RQ99062 836 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 QRSL1Q9H0R6 528 aaKnown RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 TP63Q9H3D4 680 aaPredicted RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 POLE4Q9NR33 117 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 PISDQ9UG56 409 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 LSM2Q9Y333 95 aaKnown RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 PMF1-BGLAPU3KQ54 211 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 TRIP11Q15643 1979 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 TRAV27A0A087WT01 109 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 TMEM221A6NGB7 291 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 OGG1O15527 345 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 SYT7O43581 403 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 ATG12O94817 140 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 RAB3DO95716 219 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 ZNF81P51508 661 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 DCDP81605 110 aaKnown RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 MRPL49Q13405 166 aaKnown RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 MPEG1Q2M385 716 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 TRMT12Q53H54 448 aaKnown RBP5.37□□□□□ -1.55
RTTN-209ENST00000583043 C1orf140Q5VVS0 124 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 ADGRE4PQ86SQ3 457 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 OR8H3Q8N146 312 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 SLC22A24Q8N4F4 322 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 FAM181AQ8N9Y4 354 aa5.37□□□□□ -1.55
RTTN-209ENST00000583043 MIB2Q96AX9 1013 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms