RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 HYKKA2RU49 373 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 ZNF670-ZNF695F2Z2N8 137 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 OGG1O15527 345 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 CTSVO60911 334 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 TRIM3O75382 744 aaPredicted RBP4.33□□□□□ -1.72
CDC27-215ENST00000573550 GCM2O75603 506 aaPredicted RBP4.33□□□□□ -1.72
CDC27-215ENST00000573550 LRATO95237 230 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 GADD45GO95257 159 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 SLC16A8O95907 504 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 PTHP01270 115 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 RPN2P04844 631 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 HIST1H2ABP04908 130 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 CFC1BP0CG36 223 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 CFC1P0CG37 223 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 ERGP11308 486 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 ACADMP11310 421 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 HLA-EP13747 358 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 SELLP14151 372 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 CSF2RAP15509 400 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 GALP22466 123 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 UQCRC2P22695 453 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 CFL1P23528 166 aaKnown RBP4.33□□□□□ -1.72
CDC27-215ENST00000573550 PTBP1P26599 531 aaKnown RBP eCLIP4.33□□□□□ -1.729e-78■■■■■ 64.3
CDC27-215ENST00000573550 EPHA2P29317 976 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 CSTF2P33240 577 aaKnown RBP eCLIP4.33□□□□□ -1.72
CDC27-215ENST00000573550 GSSP48637 474 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 GPR143P51810 404 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 CRISP1P54107 249 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 TBPL1P62380 186 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 TRA2BP62995 288 aaKnown RBP4.33□□□□□ -1.72
CDC27-215ENST00000573550 HBA1P69905 142 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 CDK6Q00534 326 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 SPIBQ01892 262 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 ST3GAL4Q11206 333 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 COX10Q12887 443 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 MLLT11Q13015 90 aaPredicted RBP4.33□□□□□ -1.72
CDC27-215ENST00000573550 SELENBP1Q13228 472 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 ILKQ13418 452 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 C1DQ13901 141 aaKnown RBP4.33□□□□□ -1.72
CDC27-215ENST00000573550 LRIT3Q3SXY7 679 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 ARMCX4Q5H9R4 360 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.33□□□□□ -1.72
CDC27-215ENST00000573550 AGAP6Q5VW22 663 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 SAXO2Q658L1 398 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 C12orf73Q69YU5 71 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 HIST2H2AA3Q6FI13 130 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 REEP3Q6NUK4 255 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 ZNF544Q6NX49 715 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 TMEM53Q6P2H8 277 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 PLXDC2Q6UX71 529 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 HIST3H2AQ7L7L0 130 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 BBS7Q8IWZ6 715 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 STX19Q8N4C7 294 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 PROKR2Q8NFJ6 384 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 OR8J1Q8NGP2 316 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 OR9Q1Q8NGQ5 310 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 OR2A12Q8NGT7 310 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 OR6K2Q8NGY2 324 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 SPPL2AQ8TCT8 520 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 SETD7Q8WTS6 366 aaKnown RBP4.33□□□□□ -1.72
CDC27-215ENST00000573550 SKA2Q8WVK7 121 aaPredicted RBP4.33□□□□□ -1.72
CDC27-215ENST00000573550 OR5P2Q8WZ92 322 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 ZNF689Q96CS4 500 aaPredicted RBP4.33□□□□□ -1.72
CDC27-215ENST00000573550 TPD52L3Q96J77 140 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 ST6GAL2Q96JF0 529 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 CMTM3Q96MX0 182 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 AGAP4Q96P64 663 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 OR4K3Q96R72 315 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 SLC22A12Q96S37 553 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 MGLLQ99685 303 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 SLC30A2Q9BRI3 323 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 MND1Q9BWT6 205 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 EBPLQ9BY08 206 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 PRRG3Q9BZD7 231 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 PCBD2Q9H0N5 130 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 RHBGQ9H310 441 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 ANKRD19PQ9H560 264 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 ARMC7Q9H6L4 198 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 ZDHHC6Q9H6R6 413 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 PELI2Q9HAT8 420 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 ZBTB20Q9HC78 741 aaPredicted RBP4.33□□□□□ -1.72
CDC27-215ENST00000573550 ACER3Q9NUN7 267 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 ZNF226Q9NYT6 803 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 TAS2R7Q9NYW3 318 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 AHSPQ9NZD4 102 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 SPG21Q9NZD8 308 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 DUSP12Q9UNI6 340 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 GPR34Q9UPC5 381 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 EXO1Q9UQ84 846 aaKnown RBP4.33□□□□□ -1.72
CDC27-215ENST00000573550 TCF19Q9Y242 345 aa4.33□□□□□ -1.72
CDC27-215ENST00000573550 LSM2Q9Y333 95 aaKnown RBP4.33□□□□□ -1.72
CDC27-215ENST00000573550 RPL36Q9Y3U8 105 aaKnown RBP4.33□□□□□ -1.72
CDC27-215ENST00000573550 COL4A2P08572 1712 aa4.32□□□□□ -1.72
CDC27-215ENST00000573550 A0A0U1RQS6 177 aa4.32□□□□□ -1.72
CDC27-215ENST00000573550 A0A1W2PRQ8 180 aa4.32□□□□□ -1.72
CDC27-215ENST00000573550 TRBC2A0A5B9 178 aa4.32□□□□□ -1.72
CDC27-215ENST00000573550 TMEM129A0AVI4 362 aa4.32□□□□□ -1.72
CDC27-215ENST00000573550 SNTNA6NMZ2 147 aa4.32□□□□□ -1.72
CDC27-215ENST00000573550 PDZK1P1A8MUH7 402 aa4.32□□□□□ -1.72
CDC27-215ENST00000573550 GPR89AB7ZAQ6 455 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms