RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 GSX2Q9BZM3 304 aa15.6■□□□□ 0.09
CTDNEP1-207ENST00000572043 SLC17A5Q9NRA2 495 aa15.6■□□□□ 0.09
CTDNEP1-207ENST00000572043 CISD1Q9NZ45 108 aaKnown RBP15.6■□□□□ 0.09
CTDNEP1-207ENST00000572043 B3GAT1Q9P2W7 334 aa15.6■□□□□ 0.09
CTDNEP1-207ENST00000572043 POU2F3Q9UKI9 436 aa15.6■□□□□ 0.09
CTDNEP1-207ENST00000572043 MAGED1Q9Y5V3 778 aaPredicted RBP15.6■□□□□ 0.09
CTDNEP1-207ENST00000572043 CAPN7Q9Y6W3 813 aa15.6■□□□□ 0.09
CTDNEP1-207ENST00000572043 AKAP6Q13023 2319 aa15.6■□□□□ 0.09
CTDNEP1-207ENST00000572043 F8P00451 2351 aa15.6■□□□□ 0.09
CTDNEP1-207ENST00000572043 TRIM64A6NGJ6 449 aa15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 TRIM64BA6NI03 449 aa15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 BBIP1A8MTZ0 92 aa15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 ZNF587BE7ETH6 402 aa15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 TNFRSF1BP20333 461 aa15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 CD40P25942 277 aa15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 CDKN1AP38936 164 aa15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 ATP5J2P56134 94 aa15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 INTS11Q5TA45 600 aaKnown RBP15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 CARD17Q5XLA6 110 aa15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 SLC22A25Q6T423 547 aa15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 KLHL24Q6TFL4 600 aa15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 C5orf46Q6UWT4 87 aa15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 Q71RC1 249 aaPredicted RBP15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 H1FNTQ75WM6 255 aaPredicted RBP15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 ABHD12BQ7Z5M8 362 aaPredicted RBP15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 C1orf162Q8NEQ5 155 aaPredicted RBP15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 OR8J3Q8NGG0 315 aa15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 GTPBP3Q969Y2 492 aaKnown RBP15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 OXGR1Q96P68 337 aa15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 MOGAT1Q96PD6 335 aa15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 EPYCQ99645 322 aa15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 ASPNQ9BXN1 380 aa15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 AMBRA1Q9C0C7 1298 aa15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 EVA1AQ9H8M9 152 aa15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 MRGBPQ9NV56 204 aa15.59■□□□□ 0.09
CTDNEP1-207ENST00000572043 A0A096LPE4 126 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 A0A1W2PPZ6 126 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 KPNA4O00629 521 aaPredicted RBP15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 SMAD7O15105 426 aaKnown RBP15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 SERPINI2O75830 405 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 BGLAPP02818 100 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 C8BP07358 591 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 DANCRP0C864 163 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 CRYBA2P53672 197 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 ROR2Q01974 943 aaKnown RBP15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 PGGHGQ32M88 737 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 COQ5Q5HYK3 327 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 HMBOX1Q6NT76 420 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 ZNF613Q6PF04 617 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 WDR88Q6ZMY6 472 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 SSX8Q7RTT4 187 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 CALHM3Q86XJ0 350 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 CIARTQ8N365 385 aaPredicted RBP15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 C17orf78Q8N4C9 275 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 PCYOX1LQ8NBM8 494 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 RCN3Q96D15 328 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 C18orf12Q96KH6 178 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 GID8Q9NWU2 228 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 SLC7A7Q9UM01 511 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 B3GALT5Q9Y2C3 310 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 AMDHD2Q9Y303 409 aa15.58■□□□□ 0.08
CTDNEP1-207ENST00000572043 H7C1Q1 480 aa15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 FMO6PO60774 539 aa15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 SHOX2O60902 331 aaPredicted RBP15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 HPRP00739 348 aa15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 THY1P04216 161 aa15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 HLA-DOBP13765 273 aa15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 PTAFRP25105 342 aa15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 RIPPLY3P57055 190 aa15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 PRPS1P60891 318 aa15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 TUBA1BP68363 451 aa15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 TUBA4AP68366 448 aa15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 PMS2P3Q13401 168 aa15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 TUBA1AQ71U36 451 aa15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 TSPYL5Q86VY4 417 aaPredicted RBP15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 UEVLDQ8IX04 471 aa15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 OR1K1Q8NGR3 316 aa15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 ADAMTS16Q8TE57 1224 aa15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 RADILQ96JH8 1075 aa15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 ZNF317Q96PQ6 595 aaPredicted RBP15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 EMC6Q9BV81 110 aa15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 ZNF701Q9NV72 531 aaPredicted RBP15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 SH3GLB1Q9Y371 365 aa15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 ABCA4P78363 2273 aa15.57■□□□□ 0.08
CTDNEP1-207ENST00000572043 E7EQL1 145 aa15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 MS4A18H0YCH9 400 aa15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 CHP2O43745 196 aa15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 SLC43A1O75387 559 aa15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 INHBBP09529 407 aa15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 FOSL1P15407 271 aa15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 AHCYP23526 432 aa15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 POU3F1Q03052 451 aaPredicted RBP15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 MS4A18Q3C1V0 323 aa15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 TBRG1Q3YBR2 411 aa15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 LRRC23Q53EV4 343 aaPredicted RBP15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 SWT1Q5T5J6 900 aaKnown RBP15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 PRSS57Q6UWY2 283 aa15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 B3GLCTQ6Y288 498 aa15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 CCDC80Q76M96 950 aa15.56■□□□□ 0.08
CTDNEP1-207ENST00000572043 CARM1Q86X55 608 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms