RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 COPZ1P61923 177 aa16.43■□□□□ 0.22
SCARF1-204ENST00000570902 ROR2Q01974 943 aaKnown RBP16.43■□□□□ 0.22
SCARF1-204ENST00000570902 BST1Q10588 318 aa16.43■□□□□ 0.22
SCARF1-204ENST00000570902 ADRM1Q16186 407 aa16.43■□□□□ 0.22
SCARF1-204ENST00000570902 WBP2NLQ6ICG8 309 aa16.43■□□□□ 0.22
SCARF1-204ENST00000570902 DEF8Q6ZN54 512 aa16.43■□□□□ 0.22
SCARF1-204ENST00000570902 LINGO2Q7L985 606 aa16.43■□□□□ 0.22
SCARF1-204ENST00000570902 GLCCI1Q86VQ1 547 aa16.43■□□□□ 0.22
SCARF1-204ENST00000570902 PEX5LQ8IYB4 626 aa16.43■□□□□ 0.22
SCARF1-204ENST00000570902 ZCCHC24Q8N2G6 241 aaKnown RBP16.43■□□□□ 0.22
SCARF1-204ENST00000570902 IL17RDQ8NFM7 739 aa16.43■□□□□ 0.22
SCARF1-204ENST00000570902 CKAP2Q8WWK9 683 aa16.43■□□□□ 0.22
SCARF1-204ENST00000570902 TLCD1Q96CP7 247 aa16.43■□□□□ 0.22
SCARF1-204ENST00000570902 NELFAQ9H3P2 528 aa16.43■□□□□ 0.22
SCARF1-204ENST00000570902 SEC61A2Q9H9S3 476 aa16.43■□□□□ 0.22
SCARF1-204ENST00000570902 BTNL2Q9UIR0 455 aa16.43■□□□□ 0.22
SCARF1-204ENST00000570902 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.43■□□□□ 0.22
SCARF1-204ENST00000570902 A0A096LPI6 279 aa16.42■□□□□ 0.22
SCARF1-204ENST00000570902 NR2F1P10589 423 aa16.42■□□□□ 0.22
SCARF1-204ENST00000570902 S100A3P33764 101 aa16.42■□□□□ 0.22
SCARF1-204ENST00000570902 ARR3P36575 388 aa16.42■□□□□ 0.22
SCARF1-204ENST00000570902 POU3F1Q03052 451 aaPredicted RBP16.42■□□□□ 0.22
SCARF1-204ENST00000570902 CCNIQ14094 377 aa16.42■□□□□ 0.22
SCARF1-204ENST00000570902 TRIP10Q15642 601 aa16.42■□□□□ 0.22
SCARF1-204ENST00000570902 SPANXN4Q5MJ08 99 aa16.42■□□□□ 0.22
SCARF1-204ENST00000570902 C1orf140Q5VVS0 124 aa16.42■□□□□ 0.22
SCARF1-204ENST00000570902 LSRQ86X29 649 aaPredicted RBP16.42■□□□□ 0.22
SCARF1-204ENST00000570902 EPHX4Q8IUS5 362 aa16.42■□□□□ 0.22
SCARF1-204ENST00000570902 CADM2Q8N3J6 435 aa16.42■□□□□ 0.22
SCARF1-204ENST00000570902 CCDC115Q96NT0 180 aa16.42■□□□□ 0.22
SCARF1-204ENST00000570902 METTL17Q9H7H0 456 aaPredicted RBP16.42■□□□□ 0.22
SCARF1-204ENST00000570902 PNPOQ9NVS9 261 aa16.42■□□□□ 0.22
SCARF1-204ENST00000570902 IGHV2OR16-5A0A0B4J2B6 119 aa16.41■□□□□ 0.22
SCARF1-204ENST00000570902 TMEM129A0AVI4 362 aa16.41■□□□□ 0.22
SCARF1-204ENST00000570902 SH3PXD2BA1X283 911 aa16.41■□□□□ 0.22
SCARF1-204ENST00000570902 CDHR4A6H8M9 788 aa16.41■□□□□ 0.22
SCARF1-204ENST00000570902 E9PBE3 544 aa16.41■□□□□ 0.22
SCARF1-204ENST00000570902 RPL36A-HNRNPH2H7BZ11 118 aa16.41■□□□□ 0.22
SCARF1-204ENST00000570902 FRS3O43559 492 aa16.41■□□□□ 0.22
SCARF1-204ENST00000570902 VENTXO95231 258 aa16.41■□□□□ 0.22
SCARF1-204ENST00000570902 CELA3BP08861 270 aa16.41■□□□□ 0.22
SCARF1-204ENST00000570902 ADRA2AP08913 450 aa16.41■□□□□ 0.22
SCARF1-204ENST00000570902 TFPTP0C1Z6 253 aa16.41■□□□□ 0.22
SCARF1-204ENST00000570902 IL1RL1Q01638 556 aa16.41■□□□□ 0.22
SCARF1-204ENST00000570902 BNIP2Q12982 314 aa16.41■□□□□ 0.22
SCARF1-204ENST00000570902 LIN52Q52LA3 116 aa16.41■□□□□ 0.22
SCARF1-204ENST00000570902 CCDC36Q8IYA8 594 aa16.41■□□□□ 0.22
SCARF1-204ENST00000570902 SEMA6DQ8NFY4 1073 aa16.41■□□□□ 0.22
SCARF1-204ENST00000570902 PANX1Q96RD7 426 aa16.41■□□□□ 0.22
SCARF1-204ENST00000570902 NUF2Q9BZD4 464 aa16.41■□□□□ 0.22
SCARF1-204ENST00000570902 RLIMQ9NVW2 624 aa16.41■□□□□ 0.22
SCARF1-204ENST00000570902 NKIRAS1Q9NYS0 192 aa16.41■□□□□ 0.22
SCARF1-204ENST00000570902 RCE1Q9Y256 329 aa16.41■□□□□ 0.22
SCARF1-204ENST00000570902 CCDC154A6NI56 674 aa16.4■□□□□ 0.22
SCARF1-204ENST00000570902 GKN3PP0CG01 181 aa16.4■□□□□ 0.22
SCARF1-204ENST00000570902 SLC18A1P54219 525 aa16.4■□□□□ 0.22
SCARF1-204ENST00000570902 ACTG1P63261 375 aa16.4■□□□□ 0.22
SCARF1-204ENST00000570902 ARF1P84077 181 aaKnown RBP16.4■□□□□ 0.22
SCARF1-204ENST00000570902 DAG1Q14118 895 aa16.4■□□□□ 0.22
SCARF1-204ENST00000570902 FAM174BQ3ZCQ3 159 aa16.4■□□□□ 0.22
SCARF1-204ENST00000570902 MYPOPQ86VE0 399 aaPredicted RBP16.4■□□□□ 0.22
SCARF1-204ENST00000570902 CDK20Q8IZL9 346 aa16.4■□□□□ 0.22
SCARF1-204ENST00000570902 HAO1Q9UJM8 370 aa16.4■□□□□ 0.22
SCARF1-204ENST00000570902 CMAHPQ9Y471 501 aa16.4■□□□□ 0.22
SCARF1-204ENST00000570902 TMEM229AB2RXF0 380 aa16.39■□□□□ 0.21
SCARF1-204ENST00000570902 SLC43A1O75387 559 aa16.39■□□□□ 0.21
SCARF1-204ENST00000570902 AHSA1O95433 338 aa16.39■□□□□ 0.21
SCARF1-204ENST00000570902 C1QCP02747 245 aa16.39■□□□□ 0.21
SCARF1-204ENST00000570902 ZNF43P17038 809 aa16.39■□□□□ 0.21
SCARF1-204ENST00000570902 GTF2E2P29084 291 aaKnown RBP16.39■□□□□ 0.21
SCARF1-204ENST00000570902 ACAA2P42765 397 aaKnown RBP16.39■□□□□ 0.21
SCARF1-204ENST00000570902 EVX1P49640 407 aa16.39■□□□□ 0.21
SCARF1-204ENST00000570902 COMPP49747 757 aaPredicted RBP16.39■□□□□ 0.21
SCARF1-204ENST00000570902 CLDN17P56750 224 aa16.39■□□□□ 0.21
SCARF1-204ENST00000570902 LRRC74AQ0VAA2 488 aa16.39■□□□□ 0.21
SCARF1-204ENST00000570902 NPRL3Q12980 569 aa16.39■□□□□ 0.21
SCARF1-204ENST00000570902 SNTB2Q13425 540 aaKnown RBP16.39■□□□□ 0.21
SCARF1-204ENST00000570902 SHQ1Q6PI26 577 aaKnown RBP16.39■□□□□ 0.21
SCARF1-204ENST00000570902 LRRC34Q8IZ02 419 aa16.39■□□□□ 0.21
SCARF1-204ENST00000570902 KIRREL3Q8IZU9 778 aa16.39■□□□□ 0.21
SCARF1-204ENST00000570902 GPR137CQ8N3F9 429 aa16.39■□□□□ 0.21
SCARF1-204ENST00000570902 OR52P1PQ8NH57 321 aa16.39■□□□□ 0.21
SCARF1-204ENST00000570902 MFSD8Q8NHS3 518 aa16.39■□□□□ 0.21
SCARF1-204ENST00000570902 SGMS2Q8NHU3 365 aa16.39■□□□□ 0.21
SCARF1-204ENST00000570902 STK35Q8TDR2 534 aa16.39■□□□□ 0.21
SCARF1-204ENST00000570902 ZNF418Q8TF45 676 aaPredicted RBP16.39■□□□□ 0.21
SCARF1-204ENST00000570902 TPK1Q9H3S4 243 aa16.39■□□□□ 0.21
SCARF1-204ENST00000570902 CRLF2Q9HC73 371 aa16.39■□□□□ 0.21
SCARF1-204ENST00000570902 CALML5Q9NZT1 146 aa16.39■□□□□ 0.21
SCARF1-204ENST00000570902 USP22Q9UPT9 525 aa16.39■□□□□ 0.21
SCARF1-204ENST00000570902 GRIP1Q9Y3R0 1128 aa16.39■□□□□ 0.21
SCARF1-204ENST00000570902 TENM1Q9UKZ4 2725 aa16.38■□□□□ 0.21
SCARF1-204ENST00000570902 SYNGR3O43761 229 aa16.38■□□□□ 0.21
SCARF1-204ENST00000570902 NPIPB7O75200 414 aa16.38■□□□□ 0.21
SCARF1-204ENST00000570902 ZNF432O94892 652 aa16.38■□□□□ 0.21
SCARF1-204ENST00000570902 IGFBP1P08833 259 aaPredicted RBP16.38■□□□□ 0.21
SCARF1-204ENST00000570902 NCF2P19878 526 aaPredicted RBP16.38■□□□□ 0.21
SCARF1-204ENST00000570902 SLC9B1Q4ZJI4 515 aa16.38■□□□□ 0.21
SCARF1-204ENST00000570902 AGBL2Q5U5Z8 902 aa16.38■□□□□ 0.21
SCARF1-204ENST00000570902 REP15Q6BDI9 236 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms