RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 ERICH5Q6P6B1 374 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 C16orf89Q6UX73 402 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 GRAMD2AQ8IUY3 354 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 MISPQ8IVT2 679 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 SLC30A8Q8IWU4 369 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 CLIP4Q8N3C7 705 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 RNF148Q8N7C7 305 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 ZNF527Q8NB42 609 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 FAM156AQ8NDB6 213 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 TOR1AIP2Q8NFQ8 470 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 OR52P1PQ8NH57 321 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 POC1BQ8TC44 478 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 WDR60Q8WVS4 1066 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 CNOT9Q92600 299 aaKnown RBP6.35□□□□□ -1.39
CNOT1-218ENST00000569732 ABTB1Q969K4 478 aaPredicted RBP6.35□□□□□ -1.39
CNOT1-218ENST00000569732 CDRT15Q96T59 188 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 NPAS1Q99742 590 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 ECSITQ9BQ95 431 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 TBL1XR1Q9BZK7 514 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 LAT2Q9GZY6 243 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 CXorf56Q9H5V9 222 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 EXOSC3Q9NQT5 275 aaKnown RBP6.35□□□□□ -1.39
CNOT1-218ENST00000569732 NDE1Q9NXR1 346 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 MED11Q9P086 117 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 C6orf203Q9P0P8 240 aaPredicted RBP6.35□□□□□ -1.39
CNOT1-218ENST00000569732 PPP4R1LQ9P1A2 415 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 CDC42EP3Q9UKI2 254 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 ANGPT4Q9Y264 503 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 CARD8Q9Y2G2 431 aa6.35□□□□□ -1.39
CNOT1-218ENST00000569732 CHD3Q12873 2000 aaKnown RBP6.34□□□□□ -1.39
CNOT1-218ENST00000569732 ELOVL7A1L3X0 281 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 TMEM247A6NEH6 219 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 C5orf58C9J3I9 102 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 M0QX08 132 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 FAAHO00519 579 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 AP3D1O14617 1153 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 ZNF264O43296 627 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 TLX2O43763 284 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-218ENST00000569732 TPST2O60704 377 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 CBR3O75828 277 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 NTN1O95631 604 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 OPN1SWP03999 348 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 CRHP06850 196 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 LINGO3P0C6S8 592 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 UBL4AP11441 157 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 PSMA4P25789 261 aaKnown RBP6.34□□□□□ -1.39
CNOT1-218ENST00000569732 SRD5A2P31213 254 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 KDELR2P33947 212 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 ACAA2P42765 397 aaKnown RBP6.34□□□□□ -1.39
CNOT1-218ENST00000569732 LIMS1P48059 325 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 KCNJ5P48544 419 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 CLK3P49761 638 aaKnown RBP6.34□□□□□ -1.39
CNOT1-218ENST00000569732 SUMO3P55854 103 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-218ENST00000569732 KRTAP1-1Q07627 177 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 C17orf67Q0P5P2 114 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 EPS8Q12929 822 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 FOXF2Q12947 444 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 GALEQ14376 348 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 TOMM20Q15388 145 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 TOMM34Q15785 309 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-218ENST00000569732 NPTX1Q15818 432 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 ETFDHQ16134 617 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 DUSP7Q16829 419 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 C3orf36Q3SXR2 165 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 SPATS1Q496A3 300 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 SAMD4BQ5PRF9 694 aaKnown RBP6.34□□□□□ -1.39
CNOT1-218ENST00000569732 ENPP6Q6UWR7 440 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 PLEKHM3Q6ZWE6 761 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 ASRGL1Q7L266 308 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 EIF3MQ7L2H7 374 aaKnown RBP6.34□□□□□ -1.39
CNOT1-218ENST00000569732 ADGRE4PQ86SQ3 457 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 PATL1Q86TB9 770 aaKnown RBP6.34□□□□□ -1.39
CNOT1-218ENST00000569732 IFNEQ86WN2 208 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 HIPK1Q86Z02 1210 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 PEX5LQ8IYB4 626 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 BCL6BQ8N143 479 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-218ENST00000569732 OR4D11Q8NGI4 311 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 OR1J4Q8NGS1 313 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 SVIPQ8NHG7 77 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 B4GALNT2Q8NHY0 566 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 GPR119Q8TDV5 335 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 TMEM171Q8WVE6 324 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 IGFBPL1Q8WX77 278 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 PIK3IP1Q96FE7 263 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 SH3YL1Q96HL8 342 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-218ENST00000569732 CLPTM1LQ96KA5 538 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 ARHGDIGQ99819 225 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 KCTD14Q9BQ13 255 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-218ENST00000569732 MED18Q9BUE0 208 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 CADM1Q9BY67 442 aaKnown RBP6.34□□□□□ -1.39
CNOT1-218ENST00000569732 DSN1Q9H410 356 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 GCM1Q9NP62 436 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 SDHAF3Q9NRP4 125 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-218ENST00000569732 ZNF701Q9NV72 531 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-218ENST00000569732 MED17Q9NVC6 651 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 RLIMQ9NVW2 624 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 KLHL28Q9NXS3 571 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 ADA2Q9NZK5 511 aa6.34□□□□□ -1.39
CNOT1-218ENST00000569732 PRPF19Q9UMS4 504 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms