RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 SELENONQ9NZV5 590 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 SLC13A4Q9UKG4 626 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 MGAT4BQ9UQ53 548 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 ANGPT4Q9Y264 503 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 SLC25A15Q9Y619 301 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 ZANQ9Y493 2812 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 SONP18583 2426 aaKnown RBP6.08□□□□□ -1.44
SF3B3-209ENST00000567635 JMJD1CQ15652 2540 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 TRAV36DV7A0A075B6V5 113 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 FAM171A2A8MVW0 826 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 FTCDNL1E5RQL4 147 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 ABCD4O14678 606 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 GPR37O15354 613 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 WNT11O96014 354 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 CD8AP01732 235 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 C8BP07358 591 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 SOD3P08294 240 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 VIMP08670 466 aaKnown RBP6.07□□□□□ -1.44
SF3B3-209ENST00000567635 DANCRP0C864 163 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 TROVE2P10155 538 aaKnown RBP eCLIP6.07□□□□□ -1.44
SF3B3-209ENST00000567635 ZNF43P17038 809 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 CDH2P19022 906 aaPredicted RBP6.07□□□□□ -1.44
SF3B3-209ENST00000567635 PTAFRP25105 342 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 CD40P25942 277 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 HTR2AP28223 471 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 GTF2E2P29084 291 aaKnown RBP6.07□□□□□ -1.44
SF3B3-209ENST00000567635 AQP1P29972 269 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 RGS8P57771 180 aaPredicted RBP6.07□□□□□ -1.44
SF3B3-209ENST00000567635 PRPS1P60891 318 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 NCALDP61601 193 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 C1DQ13901 141 aaKnown RBP6.07□□□□□ -1.44
SF3B3-209ENST00000567635 CYLC2Q14093 348 aaPredicted RBP6.07□□□□□ -1.44
SF3B3-209ENST00000567635 OR1Q1Q15612 314 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 PGGHGQ32M88 737 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 ALG10BQ5I7T1 473 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 FAM69AQ5T7M9 428 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 FAM91A1Q658Y4 838 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 SLC22A25Q6T423 547 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 H1FNTQ75WM6 255 aaPredicted RBP6.07□□□□□ -1.44
SF3B3-209ENST00000567635 DHDDSQ86SQ9 333 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 RETREG3Q86VR2 466 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 COMTD1Q86VU5 262 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 RANBP3LQ86VV4 465 aaPredicted RBP6.07□□□□□ -1.44
SF3B3-209ENST00000567635 PTOV1Q86YD1 416 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 EPHX4Q8IUS5 362 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 SLC30A8Q8IWU4 369 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 DEPDC4Q8N2C3 294 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 C17orf78Q8N4C9 275 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 KBTBD8Q8NFY9 601 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 GTPBP3Q969Y2 492 aaKnown RBP6.07□□□□□ -1.44
SF3B3-209ENST00000567635 BOD1Q96IK1 185 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 OXGR1Q96P68 337 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 SMR3AQ99954 134 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 SH3GL1Q99961 368 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 PTDSS2Q9BVG9 487 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 TMEM120AQ9BXJ8 343 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 AMBRA1Q9C0C7 1298 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 GRIP2Q9C0E4 1043 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 KAT8Q9H7Z6 458 aaKnown RBP6.07□□□□□ -1.44
SF3B3-209ENST00000567635 MRGBPQ9NV56 204 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 FAIMQ9NVQ4 179 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 TESQ9UGI8 421 aaKnown RBP6.07□□□□□ -1.44
SF3B3-209ENST00000567635 AMDHD2Q9Y303 409 aa6.07□□□□□ -1.44
SF3B3-209ENST00000567635 NSD1Q96L73 2696 aaPredicted RBP6.07□□□□□ -1.44
SF3B3-209ENST00000567635 FN1P02751 2386 aaKnown RBP6.07□□□□□ -1.44
SF3B3-209ENST00000567635 IGKV1D-42A0A075B6H8 117 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 A0A087WUJ7 227 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 LOC102725191A0A1B0GVB3 256 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 E7EQL1 145 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 ZNF587BE7ETH6 402 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 MS4A18H0YCH9 400 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 H7C1Q1 480 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 M0R1B8 84 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 EBAG9O00559 213 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 FBP2O00757 339 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 AIM2O14862 343 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 SMAD7O15105 426 aaKnown RBP6.06□□□□□ -1.44
SF3B3-209ENST00000567635 TPST2O60704 377 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 LY6G6DO95868 133 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 LGI1O95970 557 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 NPPAP01160 153 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 PAX7P23759 505 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 GRPRP30550 384 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 SELENOPP49908 381 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 ARFIP2P53365 341 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 CDH11P55287 796 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 CDH12P55289 794 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 CLDN17P56750 224 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 PCBP3P57721 371 aaKnown RBP6.06□□□□□ -1.44
SF3B3-209ENST00000567635 MTPNP58546 118 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 IL1RL1Q01638 556 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 LGALS3BPQ08380 585 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 SELPLGQ14242 412 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 MFSD13AQ14CX5 517 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 DUSP7Q16829 419 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 MS4A18Q3C1V0 323 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 MMEL1Q495T6 779 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 INTS11Q5TA45 600 aaKnown RBP6.06□□□□□ -1.44
SF3B3-209ENST00000567635 AGAP6Q5VW22 663 aa6.06□□□□□ -1.44
SF3B3-209ENST00000567635 NANOGP8Q6NSW7 305 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms