RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 BUB3O43684 328 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 SCN2BO60939 215 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 CLIC3O95833 236 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 HLA-HP01893 362 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 FGGP02679 453 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 ATP1A1P05023 1023 aaKnown RBP2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 ALDOBP05062 364 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 HOXD4P09016 255 aaPredicted RBP2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 RD3LP0DJH9 198 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 DAOP14920 347 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 GATA1P15976 413 aaPredicted RBP2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 SELEP16581 610 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 PSMC3P17980 439 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 NPR2P20594 1047 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 IDSP22304 550 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 SLC2A5P22732 501 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 EPHX2P34913 555 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 MAP2K2P36507 400 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 UGT2B10P36537 528 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 ACVR1BP36896 505 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 TSFMP43897 325 aaKnown RBP2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 ART1P52961 327 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 MFAP2P55001 183 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 RPS15AP62244 130 aaKnown RBP2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 CTAG1AP78358 180 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 MRPS15P82914 257 aaKnown RBP2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 IL18R1Q13478 541 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 OR5I1Q13606 314 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 KIAA0141Q14154 515 aaPredicted RBP2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 PIGHQ14442 188 aaPredicted RBP2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 OXA1LQ15070 435 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 CCDC6Q16204 474 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 HLA-BQ31612 363 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 HSDL1Q3SXM5 330 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 EIPR1Q53HC9 387 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 CARD16Q5EG05 197 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 FFAR4Q5NUL3 377 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 MORN5Q5VZ52 161 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 FAM219BQ5XKK7 198 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 REP15Q6BDI9 236 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 PVRIGQ6DKI7 326 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 PTRHD1Q6GMV3 140 aaKnown RBP2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 C1orf94Q6P1W5 598 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF549Q6P9A3 640 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF790Q6PG37 636 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 C9orf139Q6ZV77 190 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 STOX1Q6ZVD7 989 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 TRPT1Q86TN4 253 aaKnown RBP2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 LRRC49Q8IUZ0 686 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 CCDC71Q8IV32 467 aaPredicted RBP2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 IQCKQ8N0W5 287 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 SLC39A11Q8N1S5 342 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 EID2Q8N6I1 236 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF781Q8N8C0 355 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 OR5AP2Q8NGF4 316 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 OR1S2Q8NGQ3 325 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 FGF11Q92914 225 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 MYDGFQ969H8 173 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 CNRIP1Q96F85 164 aaPredicted RBP2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 CELF6Q96J87 481 aaKnown RBP2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 PRAC1Q96KF2 57 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 HSFY1Q96LI6 401 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 OR5B12Q96R08 314 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 TBX15Q96SF7 602 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 ECSITQ9BQ95 431 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 UQCC2Q9BRT2 126 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 CCDC94Q9BW85 323 aaPredicted RBP2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 TMEM59Q9BXS4 323 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 BEX2Q9BXY8 128 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 SLC29A3Q9BZD2 475 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 NAA50Q9GZZ1 169 aaKnown RBP2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 DRC3Q9H069 523 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 RACGAP1Q9H0H5 632 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 HDHD2Q9H0R4 259 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 GBA3Q9H227 469 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 NEUROG2Q9H2A3 272 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 SP140LQ9H930 580 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 PRSS16Q9NQE7 514 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 SPHK2Q9NRA0 654 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 DEPPQ9NTK1 212 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 MGAT4AQ9UM21 535 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 PPP1R3CQ9UQK1 317 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 MRPS18CQ9Y3D5 142 aaKnown RBP2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 CSNK1G3Q9Y6M4 447 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 EVPLQ92817 2033 aa2.79□□□□□ -1.96
HERPUD1-211ENST00000566550 PLA2R1Q13018 1463 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 BCL9LQ86UU0 1499 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 SHANK2Q9UPX8 1470 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 TTC3P53804 2025 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 BLMP54132 1417 aaPredicted RBP2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 GREB1LQ9C091 1923 aaPredicted RBP2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 GAKO14976 1311 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF521Q96K83 1311 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 A0A1B0GW55 424 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 A0A1W2PS18 150 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 MGAT4DA6NG13 374 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 E7ESA3 106 aa2.78□□□□□ -1.96
HERPUD1-211ENST00000566550 SMLR1H3BR10 107 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms