RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 XKRXQ6PP77 449 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 CORO6Q6QEF8 472 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 EIF3MQ7L2H7 374 aaKnown RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 LRRC70Q7Z2Q7 622 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 GLT6D1Q7Z4J2 308 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 GOLGA7Q7Z5G4 137 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 ABI3BPQ7Z7G0 1075 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 HORMAD1Q86X24 394 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 SLC30A8Q8IWU4 369 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 OR2T11Q8NH01 316 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 THAP6Q8TBB0 222 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 CD200R1Q8TD46 325 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 BLOC1S5Q8TDH9 187 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 ZFP90Q8TF47 636 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 PROX1Q92786 737 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 EXT2Q93063 718 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 NCLNQ969V3 563 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 KIAA1143Q96AT1 154 aaPredicted RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 OTUB1Q96FW1 271 aaPredicted RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 KCNA7Q96RP8 456 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 GPR21Q99679 349 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 DGCR6LQ9BY27 220 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 P2RY12Q9H244 342 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 ACTL8Q9H568 366 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 C3orf14Q9HBI5 128 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 LRTM1Q9HBL6 345 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 HHATLQ9HCP6 504 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 FKBP14Q9NWM8 211 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 CNOT2Q9NZN8 540 aaKnown RBP3.75□□□□□ -1.81
LINC00561-201ENST00000565815 ZNF229Q9UJW7 825 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 CFL2Q9Y281 166 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 CCL27Q9Y4X3 112 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 DCHS1Q96JQ0 3298 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 SDK1Q7Z5N4 2213 aa3.75□□□□□ -1.81
LINC00561-201ENST00000565815 NYNRINQ9P2P1 1898 aaKnown RBP3.74□□□□□ -1.81
LINC00561-201ENST00000565815 HYKKA2RU49 373 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 ARRDC5A6NEK1 342 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 WASH3PC4AMC7 463 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 CDC7O00311 574 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 INSIG1O15503 277 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 KDELR3O43731 214 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 C9P02748 559 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 FABP3P05413 133 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 KRT8P05787 483 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 CAPN1P07384 714 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 F7P08709 466 aaPredicted RBP3.74□□□□□ -1.81
LINC00561-201ENST00000565815 ANXA8P13928 327 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 S100A3P33764 101 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 CLK1P49759 484 aaKnown RBP3.74□□□□□ -1.81
LINC00561-201ENST00000565815 MLLT10P55197 1068 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 CDH4P55283 916 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 MTPNP58546 118 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 KCNJ8Q15842 424 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 ADPRMQ3LIE5 342 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 TMEM35AQ53FP2 167 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 PYCR3Q53H96 274 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 PAGE2BQ5JRK9 111 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 FAM182AQ5T1J6 154 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 RNLSQ5VYX0 342 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 LAIR2Q6ISS4 152 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 RPS27LQ71UM5 84 aaKnown RBP3.74□□□□□ -1.81
LINC00561-201ENST00000565815 SLC22A16Q86VW1 577 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 ZDHHC21Q8IVQ6 265 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 SLC25A45Q8N413 288 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 TTC29Q8NA56 475 aaPredicted RBP3.74□□□□□ -1.81
LINC00561-201ENST00000565815 ZNF540Q8NDQ6 660 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 GRPEL2Q8TAA5 225 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 FAM110BQ8TC76 370 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 APOBEC4Q8WW27 367 aaKnown RBP3.74□□□□□ -1.81
LINC00561-201ENST00000565815 CXorf40BQ96DE9 158 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 SPACA9Q96E40 222 aaPredicted RBP3.74□□□□□ -1.81
LINC00561-201ENST00000565815 CMTM7Q96FZ5 175 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 FCRL1Q96LA6 429 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 TEX37Q96LM6 180 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 COL21A1Q96P44 957 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 PKP4Q99569 1192 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 DDA1Q9BW61 102 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 CCDC90BQ9GZT6 254 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 HOXD1Q9GZZ0 328 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 DCSTAMPQ9H295 470 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 REEP1Q9H902 201 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 FAM120CQ9NX05 1096 aaKnown RBP3.74□□□□□ -1.81
LINC00561-201ENST00000565815 VAPAQ9P0L0 249 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 OPTCQ9UBM4 332 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 UBA2Q9UBT2 640 aaPredicted RBP3.74□□□□□ -1.81
LINC00561-201ENST00000565815 ZNF225Q9UK10 706 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 STUB1Q9UNE7 303 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 SNX6Q9UNH7 406 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 DLGAP4Q9Y2H0 992 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 POLR3HQ9Y535 204 aaPredicted RBP3.74□□□□□ -1.81
LINC00561-201ENST00000565815 TIMM22Q9Y584 194 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 ANGPTL3Q9Y5C1 460 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 XIRP2A4UGR9 3374 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.74□□□□□ -1.81
LINC00561-201ENST00000565815 A0A1W2PPK0 400 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 EFCAB10A6NFE3 127 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 KRTAP29-1A8MX34 341 aaPredicted RBP3.74□□□□□ -1.81
LINC00561-201ENST00000565815 FAM25AB3EWG3 89 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 FAM25CB3EWG5 89 aa3.74□□□□□ -1.81
LINC00561-201ENST00000565815 FAM25GB3EWG6 89 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms