RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 LBPP18428 481 aa13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 GTF2E2P29084 291 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 ACAA2P42765 397 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 DAG1Q14118 895 aa13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 LARS2Q15031 903 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 C5orf46Q6UWT4 87 aa13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 RINLQ6ZS11 566 aa13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 LINGO2Q7L985 606 aa13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 GPR137CQ8N3F9 429 aa13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 CADM2Q8N3J6 435 aa13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 SEMA6DQ8NFY4 1073 aa13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 OR52P1PQ8NH57 321 aa13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 ZNF418Q8TF45 676 aaPredicted RBP13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 SLC35B4Q969S0 331 aa13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 ROPN1BQ9BZX4 212 aaPredicted RBP13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 ROPN1Q9HAT0 212 aaPredicted RBP13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 CACYBPQ9HB71 228 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 P2RX2Q9UBL9 471 aa13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 ZNF232Q9UNY5 417 aa13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 RAP2CQ9Y3L5 183 aa13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 GRIP1Q9Y3R0 1128 aa13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 DSPPQ9NZW4 1301 aa13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 TMEM229AB2RXF0 380 aa13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 M0R233 179 aa13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 SYNGR3O43761 229 aa13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 ZNF432O94892 652 aa13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 SERPINE1P05121 402 aa13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 ADRA2AP08913 450 aa13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 NCF2P19878 526 aaPredicted RBP13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 ETV4P43268 484 aa13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 RPL14P50914 215 aaKnown RBP13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 CRISP3P54108 245 aa13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 CLDN17P56750 224 aa13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 TUBA1BP68363 451 aa13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 TUBA4AP68366 448 aa13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 ARF1P84077 181 aaKnown RBP13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 IL1RL1Q01638 556 aa13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 LGALS3BPQ08380 585 aa13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 SNTB2Q13425 540 aaKnown RBP13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 OGFOD2Q6N063 350 aa13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 USP43Q70EL4 1123 aa13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 TUBA1AQ71U36 451 aa13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 ZNF781Q8N8C0 355 aa13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 PIK3C3Q8NEB9 887 aa13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 PPP1R36Q96LQ0 422 aa13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 DENND2DQ9H6A0 471 aaPredicted RBP13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 METTL17Q9H7H0 456 aaPredicted RBP13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 RLIMQ9NVW2 624 aa13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 THUMPD1Q9NXG2 353 aaKnown RBP13.6□□□□□ -0.23
HERPUD1-205ENST00000562914 LOC102725191A0A1B0GVB3 256 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 SH3PXD2BA1X283 911 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 ZNF99A8MXY4 864 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 FTCDNL1E5RQL4 147 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 BIRC5O15392 142 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 OR2T1O43869 369 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 TYROBPO43914 113 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 FZD7O75084 574 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 VENTXO95231 258 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 GKN3PP0CG01 181 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 PNMTP11086 282 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 ACHEP22303 614 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 NR4A1P22736 598 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 ABCE1P61221 599 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 RPS23P62266 143 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 MRPS11P82912 194 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 IFFO1Q0D2I5 559 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 BNIP2Q12982 314 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 TRIP10Q15642 601 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 SHQ1Q6PI26 577 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 ZNF836Q6ZNA1 936 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 ZNF621Q6ZSS3 439 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 CDK20Q8IZL9 346 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 ZCCHC24Q8N2G6 241 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 MRPL24Q96A35 216 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 TMEM186Q96B77 213 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 OXGR1Q96P68 337 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 OR52E6Q96RD3 313 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 JMJD8Q96S16 334 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 SEC61A2Q9H9S3 476 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 NOX3Q9HBY0 568 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 CRLF2Q9HC73 371 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 GPR35Q9HC97 309 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 REV1Q9UBZ9 1251 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 IFT52Q9Y366 437 aa13.59□□□□□ -0.23
HERPUD1-205ENST00000562914 TMEM247A6NEH6 219 aa13.58□□□□□ -0.24
HERPUD1-205ENST00000562914 WIPF1O43516 503 aa13.58□□□□□ -0.24
HERPUD1-205ENST00000562914 MSMBP08118 114 aa13.58□□□□□ -0.24
HERPUD1-205ENST00000562914 IGFBP1P08833 259 aaPredicted RBP13.58□□□□□ -0.24
HERPUD1-205ENST00000562914 CELA3BP08861 270 aa13.58□□□□□ -0.24
HERPUD1-205ENST00000562914 GPR6P46095 362 aaPredicted RBP13.58□□□□□ -0.24
HERPUD1-205ENST00000562914 TMEM33P57088 247 aa13.58□□□□□ -0.24
HERPUD1-205ENST00000562914 ACTG1P63261 375 aa13.58□□□□□ -0.24
HERPUD1-205ENST00000562914 NPRL3Q12980 569 aa13.58□□□□□ -0.24
HERPUD1-205ENST00000562914 C1DQ13901 141 aaKnown RBP13.58□□□□□ -0.24
HERPUD1-205ENST00000562914 CCNIQ14094 377 aa13.58□□□□□ -0.24
HERPUD1-205ENST00000562914 CEACAM16Q2WEN9 425 aa13.58□□□□□ -0.24
HERPUD1-205ENST00000562914 NET1Q7Z628 596 aaPredicted RBP13.58□□□□□ -0.24
HERPUD1-205ENST00000562914 MYPOPQ86VE0 399 aaPredicted RBP13.58□□□□□ -0.24
HERPUD1-205ENST00000562914 SNX32Q86XE0 403 aa13.58□□□□□ -0.24
HERPUD1-205ENST00000562914 VRK2Q86Y07 508 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms