RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 A0A0B4J2E0 115 aa15.06■□□□□ 0
CDC42BPB-208ENST00000561271 A0A1B0GX12 115 aa15.06■□□□□ 0
CDC42BPB-208ENST00000561271 E7EQL1 145 aa15.06■□□□□ 0
CDC42BPB-208ENST00000561271 ZNF587BE7ETH6 402 aa15.06■□□□□ 0
CDC42BPB-208ENST00000561271 M0R3H8 397 aa15.06■□□□□ 0
CDC42BPB-208ENST00000561271 FZD7O75084 574 aa15.06■□□□□ 0
CDC42BPB-208ENST00000561271 NDUFS7O75251 213 aa15.06■□□□□ 0
CDC42BPB-208ENST00000561271 SERPINB7O75635 380 aa15.06■□□□□ 0
CDC42BPB-208ENST00000561271 MFN2O95140 757 aa15.06■□□□□ 0
CDC42BPB-208ENST00000561271 LGI1O95970 557 aa15.06■□□□□ 0
CDC42BPB-208ENST00000561271 IGHV4-39P01824 125 aa15.06■□□□□ 0
CDC42BPB-208ENST00000561271 CBLP22681 906 aa15.06■□□□□ 0
CDC42BPB-208ENST00000561271 GRPRP30550 384 aa15.06■□□□□ 0
CDC42BPB-208ENST00000561271 CLDN17P56750 224 aa15.06■□□□□ 0
CDC42BPB-208ENST00000561271 PCBP3P57721 371 aaKnown RBP15.06■□□□□ 0
CDC42BPB-208ENST00000561271 FAM69AQ5T7M9 428 aa15.06■□□□□ 0
CDC42BPB-208ENST00000561271 ULK3Q6PHR2 472 aa15.06■□□□□ 0
CDC42BPB-208ENST00000561271 KLHL24Q6TFL4 600 aa15.06■□□□□ 0
CDC42BPB-208ENST00000561271 DTX2Q86UW9 622 aa15.06■□□□□ 0
CDC42BPB-208ENST00000561271 DNAJA4Q8WW22 397 aaPredicted RBP15.06■□□□□ 0
CDC42BPB-208ENST00000561271 TRMT61AQ96FX7 289 aaKnown RBP15.06■□□□□ 0
CDC42BPB-208ENST00000561271 KLHL14Q9P2G3 628 aa15.06■□□□□ 0
CDC42BPB-208ENST00000561271 GDF2Q9UK05 429 aaPredicted RBP15.06■□□□□ 0
CDC42BPB-208ENST00000561271 TRAV36DV7A0A075B6V5 113 aa15.05■□□□□ -0
CDC42BPB-208ENST00000561271 FAM171A2A8MVW0 826 aa15.05■□□□□ -0
CDC42BPB-208ENST00000561271 AIM2O14862 343 aa15.05■□□□□ -0
CDC42BPB-208ENST00000561271 TPST2O60704 377 aa15.05■□□□□ -0
CDC42BPB-208ENST00000561271 UPK3AO75631 287 aa15.05■□□□□ -0
CDC42BPB-208ENST00000561271 IL1RL1Q01638 556 aa15.05■□□□□ -0
CDC42BPB-208ENST00000561271 SF3A3Q12874 501 aaKnown RBP eCLIP15.05■□□□□ -0
CDC42BPB-208ENST00000561271 TNK1Q13470 666 aa15.05■□□□□ -0
CDC42BPB-208ENST00000561271 OR1Q1Q15612 314 aa15.05■□□□□ -0
CDC42BPB-208ENST00000561271 CLEC12BQ2HXU8 276 aa15.05■□□□□ -0
CDC42BPB-208ENST00000561271 FAM91A1Q658Y4 838 aa15.05■□□□□ -0
CDC42BPB-208ENST00000561271 C5orf46Q6UWT4 87 aa15.05■□□□□ -0
CDC42BPB-208ENST00000561271 ABHD12BQ7Z5M8 362 aaPredicted RBP15.05■□□□□ -0
CDC42BPB-208ENST00000561271 RANBP3LQ86VV4 465 aaPredicted RBP15.05■□□□□ -0
CDC42BPB-208ENST00000561271 BHLHE22Q8NFJ8 381 aaPredicted RBP15.05■□□□□ -0
CDC42BPB-208ENST00000561271 OR1K1Q8NGR3 316 aa15.05■□□□□ -0
CDC42BPB-208ENST00000561271 SLC47A1Q96FL8 570 aa15.05■□□□□ -0
CDC42BPB-208ENST00000561271 RADILQ96JH8 1075 aa15.05■□□□□ -0
CDC42BPB-208ENST00000561271 SELENONQ9NZV5 590 aa15.05■□□□□ -0
CDC42BPB-208ENST00000561271 ATP6V1G2-DDX39BF2Z307 99 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 FBP2O00757 339 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 OR2T1O43869 369 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 ZNF43P17038 809 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 ACVR1BP36896 505 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 PRPS1P60891 318 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 TUBA1BP68363 451 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 TUBA4AP68366 448 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 RBBP4Q09028 425 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 TBRG1Q3YBR2 411 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 AGAP6Q5VW22 663 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 TUBA1AQ71U36 451 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 NET1Q7Z628 596 aaPredicted RBP15.04■□□□□ -0
CDC42BPB-208ENST00000561271 GPR32P1Q8NGA4 272 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 TSPEARQ8WU66 669 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 OXGR1Q96P68 337 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 ARHGDIGQ99819 225 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 DHRS9Q9BPW9 319 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 CACNG6Q9BXT2 260 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 KAT8Q9H7Z6 458 aaKnown RBP15.04■□□□□ -0
CDC42BPB-208ENST00000561271 TMEM27Q9HBJ8 222 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 FGFR1OP2Q9NVK5 253 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 RCE1Q9Y256 329 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 MALRD1Q5VYJ5 2156 aa15.04■□□□□ -0
CDC42BPB-208ENST00000561271 A0A087WUJ7 227 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 TRAF3IP2O43734 574 aaPredicted RBP15.03■□□□□ -0
CDC42BPB-208ENST00000561271 ZNF432O94892 652 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 WNT11O96014 354 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 HPRP00739 348 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 TTKP33981 857 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 PCGF2P35227 344 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 CDH12P55289 794 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 ROR2Q01974 943 aaKnown RBP15.03■□□□□ -0
CDC42BPB-208ENST00000561271 C1DQ13901 141 aaKnown RBP15.03■□□□□ -0
CDC42BPB-208ENST00000561271 NPTX1Q15818 432 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 ETFDHQ16134 617 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 NRF1Q16656 503 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 DUSP7Q16829 419 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 TRMT5Q32P41 509 aaKnown RBP15.03■□□□□ -0
CDC42BPB-208ENST00000561271 KRTAP21-3Q3LHN1 58 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 C11orf71Q6IPW1 123 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 CGB2Q6NT52 195 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 MAPK1IP1LQ8NDC0 245 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 OR10A6Q8NH74 314 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 VANGL1Q8TAA9 524 aaPredicted RBP15.03■□□□□ -0
CDC42BPB-208ENST00000561271 TAMM41Q96BW9 452 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 HS6ST2Q96MM7 605 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 MOGAT1Q96PD6 335 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 MCHR1Q99705 422 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 LINC00470Q9BZP3 86 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 NELFAQ9H3P2 528 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 ZNF446Q9NWS9 450 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 B3GALT5Q9Y2C3 310 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 ATP23Q9Y6H3 246 aa15.03■□□□□ -0
CDC42BPB-208ENST00000561271 A0A096LPE4 126 aa15.02■□□□□ -0
CDC42BPB-208ENST00000561271 A0A1W2PPZ6 126 aa15.02■□□□□ -0
CDC42BPB-208ENST00000561271 OR6C65A6NJZ3 312 aa15.02■□□□□ -0
CDC42BPB-208ENST00000561271 RNF223E7ERA6 249 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms