RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 IDNKQ5T6J7 187 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 OGFRL1Q5TC84 451 aaPredicted RBP1.76□□□□□ -2.13
RTF1-207ENST00000561076 RNLSQ5VYX0 342 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 DUPD1Q68J44 220 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 TIGD3Q6B0B8 471 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 ARMCX5Q6P1M9 558 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 C8orf82Q6P1X6 216 aaPredicted RBP1.76□□□□□ -2.13
RTF1-207ENST00000561076 TTC33Q6PID6 262 aaPredicted RBP1.76□□□□□ -2.13
RTF1-207ENST00000561076 TMIGD1Q6UXZ0 262 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 ZNF782Q6ZMW2 699 aaPredicted RBP1.76□□□□□ -2.13
RTF1-207ENST00000561076 LIN28BQ6ZN17 250 aaKnown RBP eCLIP1.76□□□□□ -2.13
RTF1-207ENST00000561076 Q6ZN92 141 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 SH2D5Q6ZV89 423 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 CREB3L2Q70SY1 520 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 COX15Q7KZN9 410 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 GDPD3Q7L5L3 318 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 PRSS48Q7RTY5 328 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 YTHDF3Q7Z739 585 aaKnown RBP1.76□□□□□ -2.13
RTF1-207ENST00000561076 RBM23Q86U06 439 aaKnown RBP1.76□□□□□ -2.13
RTF1-207ENST00000561076 APOBEC3FQ8IUX4 373 aaKnown RBP1.76□□□□□ -2.13
RTF1-207ENST00000561076 FUNDC1Q8IVP5 155 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 OR4N5Q8IXE1 308 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 PDIK1LQ8N165 341 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 SYS1Q8N2H4 156 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 KIF2BQ8N4N8 673 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 CSNK1A1LQ8N752 337 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 TMEM178AQ8NBL3 297 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 SLC16A11Q8NCK7 471 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 SMRP1Q8NCR6 262 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 OR2T33Q8NG76 320 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 OR13A1Q8NGR1 328 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 OR5AK3PQ8NH89 298 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 OR1L3Q8NH93 324 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 LGALS14Q8TCE9 139 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 SPPL2AQ8TCT8 520 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 ZNRF4Q8WWF5 429 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 NR4A3Q92570 626 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 CD101Q93033 1021 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 TOMM40LQ969M1 308 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 S100PBPQ96BU1 408 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 FAF2Q96CS3 445 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 CENPNQ96H22 339 aaPredicted RBP1.76□□□□□ -2.13
RTF1-207ENST00000561076 URB1-AS1Q96HZ7 61 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 ST6GAL2Q96JF0 529 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 CAPNS2Q96L46 248 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 C2orf48Q96LS8 159 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 WWC2-AS2Q96NR7 200 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 OR5B12Q96R08 314 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 KCTD14Q9BQ13 255 aaPredicted RBP1.76□□□□□ -2.13
RTF1-207ENST00000561076 ECSITQ9BQ95 431 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 CALN1Q9BXU9 219 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 MAP1LC3CQ9BXW4 147 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 BEX2Q9BXY8 128 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 ANGPTL4Q9BY76 406 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 NMUR2Q9GZQ4 415 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 CSTL1Q9H114 145 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 DEFB129Q9H1M3 183 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 SLC38A1Q9H2H9 487 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 OR51M1Q9H341 326 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 ISG20L2Q9H9L3 353 aaKnown RBP1.76□□□□□ -2.13
RTF1-207ENST00000561076 SIAEQ9HAT2 523 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 RETNQ9HD89 108 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 B3GAT2Q9NPZ5 323 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 AGPAT4Q9NRZ5 378 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 FGFR1OP2Q9NVK5 253 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 SLC39A1Q9NY26 324 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 ELOVL5Q9NYP7 299 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 SIGLEC8Q9NYZ4 499 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 KCNIP1Q9NZI2 227 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 TMEM181Q9P2C4 612 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 WARS2Q9UGM6 360 aaKnown RBP1.76□□□□□ -2.13
RTF1-207ENST00000561076 SLC2A6Q9UGQ3 507 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 LSM7Q9UK45 103 aaKnown RBP1.76□□□□□ -2.13
RTF1-207ENST00000561076 SCML2Q9UQR0 700 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 ASF1AQ9Y294 204 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 SLC17A4Q9Y2C5 497 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 POFUT2Q9Y2G5 429 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 PPP2R2CQ9Y2T4 447 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 PLLPQ9Y342 182 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 FADS3Q9Y5Q0 445 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 AUP1Q9Y679 476 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 SCRIBQ14160 1630 aa1.76□□□□□ -2.13
RTF1-207ENST00000561076 SNED1Q8TER0 1413 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 CGNL1Q0VF96 1302 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 MAP3K15Q6ZN16 1313 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 TTC21AQ8NDW8 1320 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 IGHV4OR15-8A0A075B7B6 117 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 IGLV5-52A0A0A0MRZ9 124 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 IGHV4-61A0A0C4DH41 118 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 SMIM28A0A1B0GU29 152 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 A0A1W2PS18 150 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 BCLAF3A2AJT9 711 aaKnown RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 TMEM213A2RRL7 107 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 CLEC18AA5D8T8 446 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 GOLGA6L4A6NEF3 574 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 FABP12A6NFH5 140 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 IGLON5A6NGN9 336 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 OTOL1A6NHN0 477 aaPredicted RBP1.75□□□□□ -2.13
RTF1-207ENST00000561076 GJE1A6NN92 205 aa1.75□□□□□ -2.13
RTF1-207ENST00000561076 HACD1B0YJ81 288 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms