RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 COL8A2P25067 703 aa15.95■□□□□ 0.14
TPM1-226ENST00000560959 ALDH3A1P30838 453 aa15.95■□□□□ 0.14
TPM1-226ENST00000560959 ARF1P84077 181 aaKnown RBP15.95■□□□□ 0.14
TPM1-226ENST00000560959 MYBPC1Q00872 1141 aa15.95■□□□□ 0.14
TPM1-226ENST00000560959 SNTB2Q13425 540 aaKnown RBP15.95■□□□□ 0.14
TPM1-226ENST00000560959 SHISA2Q6UWI4 295 aa15.95■□□□□ 0.14
TPM1-226ENST00000560959 LRRC74BQ6ZQY2 392 aa15.95■□□□□ 0.14
TPM1-226ENST00000560959 C1orf229Q6ZS94 237 aaPredicted RBP15.95■□□□□ 0.14
TPM1-226ENST00000560959 ZCCHC23Q6ZST2 131 aa15.95■□□□□ 0.14
TPM1-226ENST00000560959 ZIM3Q96PE6 472 aa15.95■□□□□ 0.14
TPM1-226ENST00000560959 CRLF2Q9HC73 371 aa15.95■□□□□ 0.14
TPM1-226ENST00000560959 SLC52A3Q9NQ40 469 aa15.95■□□□□ 0.14
TPM1-226ENST00000560959 ADPRHL2Q9NX46 363 aa15.95■□□□□ 0.14
TPM1-226ENST00000560959 NPIPB7O75200 414 aa15.94■□□□□ 0.14
TPM1-226ENST00000560959 HPXP02790 462 aa15.94■□□□□ 0.14
TPM1-226ENST00000560959 DBIP07108 87 aaKnown RBP15.94■□□□□ 0.14
TPM1-226ENST00000560959 CHRM4P08173 479 aa15.94■□□□□ 0.14
TPM1-226ENST00000560959 IL7RP16871 459 aa15.94■□□□□ 0.14
TPM1-226ENST00000560959 PRAMEF8Q5VWM4 474 aa15.94■□□□□ 0.14
TPM1-226ENST00000560959 PRAMEF7Q5VXH5 474 aa15.94■□□□□ 0.14
TPM1-226ENST00000560959 HMGN2P46Q86SG4 172 aa15.94■□□□□ 0.14
TPM1-226ENST00000560959 C17orf53Q8N3J3 647 aaPredicted RBP15.94■□□□□ 0.14
TPM1-226ENST00000560959 RIBC1Q8N443 379 aaPredicted RBP15.94■□□□□ 0.14
TPM1-226ENST00000560959 MRPL37Q9BZE1 423 aaKnown RBP15.94■□□□□ 0.14
TPM1-226ENST00000560959 LPAR2Q9HBW0 351 aa15.94■□□□□ 0.14
TPM1-226ENST00000560959 G6PC2Q9NQR9 355 aa15.94■□□□□ 0.14
TPM1-226ENST00000560959 MKS1Q9NXB0 559 aa15.94■□□□□ 0.14
TPM1-226ENST00000560959 TREM2Q9NZC2 230 aa15.94■□□□□ 0.14
TPM1-226ENST00000560959 MARCOQ9UEW3 520 aaPredicted RBP15.94■□□□□ 0.14
TPM1-226ENST00000560959 ZDHHC2Q9UIJ5 367 aa15.94■□□□□ 0.14
TPM1-226ENST00000560959 FRS3O43559 492 aa15.93■□□□□ 0.14
TPM1-226ENST00000560959 RGS9O75916 674 aaPredicted RBP15.93■□□□□ 0.14
TPM1-226ENST00000560959 FAM153BP0C7A2 387 aa15.93■□□□□ 0.14
TPM1-226ENST00000560959 GLRXP35754 106 aa15.93■□□□□ 0.14
TPM1-226ENST00000560959 FOXL1Q12952 345 aa15.93■□□□□ 0.14
TPM1-226ENST00000560959 NPRL3Q12980 569 aa15.93■□□□□ 0.14
TPM1-226ENST00000560959 CASP8Q14790 479 aa15.93■□□□□ 0.14
TPM1-226ENST00000560959 MRPL2Q5T653 305 aaKnown RBP15.93■□□□□ 0.14
TPM1-226ENST00000560959 C1orf140Q5VVS0 124 aa15.93■□□□□ 0.14
TPM1-226ENST00000560959 WBP2NLQ6ICG8 309 aa15.93■□□□□ 0.14
TPM1-226ENST00000560959 KRT80Q6KB66 452 aa15.93■□□□□ 0.14
TPM1-226ENST00000560959 CARM1Q86X55 608 aa15.93■□□□□ 0.14
TPM1-226ENST00000560959 MFSD8Q8NHS3 518 aa15.93■□□□□ 0.14
TPM1-226ENST00000560959 AGR3Q8TD06 166 aa15.93■□□□□ 0.14
TPM1-226ENST00000560959 STK35Q8TDR2 534 aa15.93■□□□□ 0.14
TPM1-226ENST00000560959 TESCQ96BS2 214 aa15.93■□□□□ 0.14
TPM1-226ENST00000560959 ZNF416Q9BWM5 594 aa15.93■□□□□ 0.14
TPM1-226ENST00000560959 DPY30Q9C005 99 aa15.93■□□□□ 0.14
TPM1-226ENST00000560959 ZNF385DQ9H6B1 395 aa15.93■□□□□ 0.14
TPM1-226ENST00000560959 GPR35Q9HC97 309 aa15.93■□□□□ 0.14
TPM1-226ENST00000560959 ZNF275Q9NSD4 429 aaPredicted RBP15.93■□□□□ 0.14
TPM1-226ENST00000560959 B3GNT2Q9NY97 397 aa15.93■□□□□ 0.14
TPM1-226ENST00000560959 TGP01266 2768 aa15.93■□□□□ 0.14
TPM1-226ENST00000560959 ZNF503-AS2A6NEH8 195 aa15.92■□□□□ 0.14
TPM1-226ENST00000560959 J3QLI3 93 aa15.92■□□□□ 0.14
TPM1-226ENST00000560959 WNT9BO14905 357 aa15.92■□□□□ 0.14
TPM1-226ENST00000560959 SLC43A1O75387 559 aa15.92■□□□□ 0.14
TPM1-226ENST00000560959 AVPP01185 164 aa15.92■□□□□ 0.14
TPM1-226ENST00000560959 ZNF35P13682 527 aa15.92■□□□□ 0.14
TPM1-226ENST00000560959 ZNF43P17038 809 aa15.92■□□□□ 0.14
TPM1-226ENST00000560959 CHI3L1P36222 383 aaPredicted RBP15.92■□□□□ 0.14
TPM1-226ENST00000560959 ACAA2P42765 397 aaKnown RBP15.92■□□□□ 0.14
TPM1-226ENST00000560959 ANXA11P50995 505 aaKnown RBP15.92■□□□□ 0.14
TPM1-226ENST00000560959 COPZ1P61923 177 aa15.92■□□□□ 0.14
TPM1-226ENST00000560959 SYPL1Q16563 259 aa15.92■□□□□ 0.14
TPM1-226ENST00000560959 MMEL1Q495T6 779 aa15.92■□□□□ 0.14
TPM1-226ENST00000560959 ACSM5Q6NUN0 579 aa15.92■□□□□ 0.14
TPM1-226ENST00000560959 THSD4Q6ZMP0 1018 aa15.92■□□□□ 0.14
TPM1-226ENST00000560959 C1QL2Q7Z5L3 287 aa15.92■□□□□ 0.14
TPM1-226ENST00000560959 MDP1Q86V88 176 aa15.92■□□□□ 0.14
TPM1-226ENST00000560959 C4orf33Q8N1A6 199 aa15.92■□□□□ 0.14
TPM1-226ENST00000560959 ANKFN1Q8N957 763 aa15.92■□□□□ 0.14
TPM1-226ENST00000560959 SLC35A5Q9BS91 424 aa15.92■□□□□ 0.14
TPM1-226ENST00000560959 DENND2DQ9H6A0 471 aaPredicted RBP15.92■□□□□ 0.14
TPM1-226ENST00000560959 CDHR4A6H8M9 788 aa15.91■□□□□ 0.14
TPM1-226ENST00000560959 ZNF99A8MXY4 864 aaPredicted RBP15.91■□□□□ 0.14
TPM1-226ENST00000560959 FZD7O75084 574 aa15.91■□□□□ 0.14
TPM1-226ENST00000560959 CPSF4O95639 269 aaKnown RBP15.91■□□□□ 0.14
TPM1-226ENST00000560959 BCL10O95999 233 aa15.91■□□□□ 0.14
TPM1-226ENST00000560959 CLDN17P56750 224 aa15.91■□□□□ 0.14
TPM1-226ENST00000560959 BNIP2Q12982 314 aa15.91■□□□□ 0.14
TPM1-226ENST00000560959 MSMPQ1L6U9 139 aa15.91■□□□□ 0.14
TPM1-226ENST00000560959 DPY19L1Q2PZI1 675 aa15.91■□□□□ 0.14
TPM1-226ENST00000560959 CEACAM16Q2WEN9 425 aa15.91■□□□□ 0.14
TPM1-226ENST00000560959 ANKRD46Q86W74 232 aa15.91■□□□□ 0.14
TPM1-226ENST00000560959 GPR137CQ8N3F9 429 aa15.91■□□□□ 0.14
TPM1-226ENST00000560959 ZDHHC22Q8N966 263 aa15.91■□□□□ 0.14
TPM1-226ENST00000560959 YIPF5Q969M3 257 aa15.91■□□□□ 0.14
TPM1-226ENST00000560959 OXGR1Q96P68 337 aa15.91■□□□□ 0.14
TPM1-226ENST00000560959 NARFLQ9H6Q4 476 aa15.91■□□□□ 0.14
TPM1-226ENST00000560959 NTN4Q9HB63 628 aa15.91■□□□□ 0.14
TPM1-226ENST00000560959 PCDHGB1Q9Y5G3 927 aa15.91■□□□□ 0.14
TPM1-226ENST00000560959 LOC105371242A0A075B767 164 aa15.9■□□□□ 0.14
TPM1-226ENST00000560959 LOC102725191A0A1B0GVB3 256 aa15.9■□□□□ 0.14
TPM1-226ENST00000560959 FTCDNL1E5RQL4 147 aa15.9■□□□□ 0.14
TPM1-226ENST00000560959 PPIHO43447 177 aaKnown RBP15.9■□□□□ 0.14
TPM1-226ENST00000560959 RP2O75695 350 aa15.9■□□□□ 0.14
TPM1-226ENST00000560959 SHBGP04278 402 aa15.9■□□□□ 0.14
TPM1-226ENST00000560959 TCN1P20061 433 aaPredicted RBP15.9■□□□□ 0.14
TPM1-226ENST00000560959 ARRB2P32121 409 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms