RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 MST1LQ2TV78 715 aa8.92□□□□□ -0.98
LDLR-214ENST00000560628 HMBOX1Q6NT76 420 aa8.92□□□□□ -0.98
LDLR-214ENST00000560628 ZNF544Q6NX49 715 aa8.92□□□□□ -0.98
LDLR-214ENST00000560628 DHRS4L2Q6PKH6 230 aa8.92□□□□□ -0.98
LDLR-214ENST00000560628 CLEC2AQ6UVW9 174 aa8.92□□□□□ -0.98
LDLR-214ENST00000560628 KRT73Q86Y46 540 aa8.92□□□□□ -0.98
LDLR-214ENST00000560628 ZNF525Q8N782 197 aa8.92□□□□□ -0.98
LDLR-214ENST00000560628 OR10H5Q8NGA6 315 aa8.92□□□□□ -0.98
LDLR-214ENST00000560628 FBXO17Q96EF6 278 aa8.92□□□□□ -0.98
LDLR-214ENST00000560628 OXGR1Q96P68 337 aa8.92□□□□□ -0.98
LDLR-214ENST00000560628 WFDC6Q9BQY6 131 aa8.92□□□□□ -0.98
LDLR-214ENST00000560628 ABCA1O95477 2261 aa8.92□□□□□ -0.98
LDLR-214ENST00000560628 PLCE1Q9P212 2302 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 IGKV1D-42A0A075B6H8 117 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 TRAV36DV7A0A075B6V5 113 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 TRBV5-3A0A0A0MS03 114 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 OR6C65A6NJZ3 312 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 EVPLLA8MZ36 301 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 M0R082 166 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 GPX2P18283 190 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 PPIBP23284 216 aaKnown RBP8.91□□□□□ -0.98
LDLR-214ENST00000560628 SLC6A2P23975 617 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 GRPRP30550 384 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 RGS8P57771 180 aaPredicted RBP8.91□□□□□ -0.98
LDLR-214ENST00000560628 SQLEQ14534 574 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 OR1Q1Q15612 314 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 ADRM1Q16186 407 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 ALG10BQ5I7T1 473 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 CARD17Q5XLA6 110 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 ANKRD16Q6P6B7 361 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 VHLLQ6RSH7 139 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 C6orf89Q6UWU4 347 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 DLEU7Q6UYE1 221 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 H1FNTQ75WM6 255 aaPredicted RBP8.91□□□□□ -0.98
LDLR-214ENST00000560628 LSMEM1Q8N8F7 131 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 SMYD1Q8NB12 490 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 ZNF417Q8TAU3 575 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 DNAJA4Q8WW22 397 aaPredicted RBP8.91□□□□□ -0.98
LDLR-214ENST00000560628 NANOS1Q8WY41 292 aaKnown RBP8.91□□□□□ -0.98
LDLR-214ENST00000560628 SLC38A4Q969I6 547 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 SLC35B4Q969S0 331 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 ZNF837Q96EG3 531 aaPredicted RBP8.91□□□□□ -0.98
LDLR-214ENST00000560628 SLC47A1Q96FL8 570 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 BOD1Q96IK1 185 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 SLC38A2Q96QD8 506 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 ZNF587Q96SQ5 575 aaPredicted RBP8.91□□□□□ -0.98
LDLR-214ENST00000560628 KCNS3Q9BQ31 491 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 SPATA5L1Q9BVQ7 753 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 LINC00470Q9BZP3 86 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 SEC61A2Q9H9S3 476 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 TMEM27Q9HBJ8 222 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 INTS9Q9NV88 658 aaKnown RBP8.91□□□□□ -0.98
LDLR-214ENST00000560628 SELENONQ9NZV5 590 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 B3GAT1Q9P2W7 334 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 SLC13A4Q9UKG4 626 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 PMF1-BGLAPU3KQ54 211 aa8.91□□□□□ -0.98
LDLR-214ENST00000560628 NSD1Q96L73 2696 aaPredicted RBP8.91□□□□□ -0.98
LDLR-214ENST00000560628 ZANQ9Y493 2812 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 A0A096LNT2 108 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 MS4A18H0YCH9 400 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 H7C417 338 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 AIM2O14862 343 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 CD5LO43866 347 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 OR2T1O43869 369 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 TPST2O60704 377 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 SLC43A1O75387 559 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 SERPINB7O75635 380 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 ZNF432O94892 652 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 HPRP00739 348 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 CRYAAP02489 173 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 BMP4P12644 408 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 HLA-DOBP13765 273 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 ATP4BP51164 291 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 EFNA4P52798 201 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 DSCR9P59020 149 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 NCALDP61601 193 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 MS4A18Q3C1V0 323 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 RUNDC3AQ59EK9 446 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 PHYHD1Q5SRE7 291 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 C1QTNF12Q5T7M4 302 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 FAM69AQ5T7M9 428 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 ULK3Q6PHR2 472 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 NET1Q7Z628 596 aaPredicted RBP8.9□□□□□ -0.98
LDLR-214ENST00000560628 ARMC8Q8IUR7 673 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 GPR137CQ8N3F9 429 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 C10orf53Q8N6V4 93 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 HIPK4Q8NE63 616 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 FAM168AQ92567 244 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 ZNF607Q96SK3 696 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 CPPED1Q9BRF8 314 aaPredicted RBP8.9□□□□□ -0.98
LDLR-214ENST00000560628 EMC6Q9BV81 110 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 NELFAQ9H3P2 528 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 TMEM38AQ9H6F2 299 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 C12orf10Q9HB07 376 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 CRLF2Q9HC73 371 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 GPR35Q9HC97 309 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 OBP2BQ9NPH6 170 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 KLHL14Q9P2G3 628 aa8.9□□□□□ -0.98
LDLR-214ENST00000560628 CR1P17927 2039 aa8.9□□□□□ -0.99
LDLR-214ENST00000560628 SONP18583 2426 aaKnown RBP8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms