RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 UPK3AO75631 287 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 IGFBP1P08833 259 aaPredicted RBP15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 COL8A2P25067 703 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 EVX1P49640 407 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 VSNL1P62760 191 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 GNA13Q14344 377 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 PRAMEF8Q5VWM4 474 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 PRAMEF7Q5VXH5 474 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 ACSM5Q6NUN0 579 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 FRRS1Q6ZNA5 592 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 MYPOPQ86VE0 399 aaPredicted RBP15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 RIMKLAQ8IXN7 391 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 CMIPQ8IY22 773 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 OR4M2Q8NGB6 313 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 OR4A15Q8NGL6 344 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 NANPQ8TBE9 248 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 MIPOL1Q8TD10 442 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 AENQ8WTP8 325 aaKnown RBP15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 CNOT9Q92600 299 aaKnown RBP15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 RAB8BQ92930 207 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 MECRQ9BV79 373 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 LINC00470Q9BZP3 86 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 RACGAP1Q9H0H5 632 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 NOX3Q9HBY0 568 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 ZNF275Q9NSD4 429 aaPredicted RBP15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 CFAP73A6NFT4 308 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 TYROBPO43914 113 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 HPXP02790 462 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 NR4A1P22736 598 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 FPR2P25090 351 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 ETV4P43268 484 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 ARF1P84077 181 aaKnown RBP15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 EMX2Q04743 252 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 AP1ARQ63HQ0 302 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 RBMS3Q6XE24 437 aaKnown RBP15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 LINGO2Q7L985 606 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 C1QL2Q7Z5L3 287 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 CCDC36Q8IYA8 594 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 CLECL1Q8IZS7 167 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 KIRREL3Q8IZU9 778 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 LRRC17Q8N6Y2 441 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 AGR3Q8TD06 166 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 ZG16BQ96DA0 208 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 C3orf30Q96M34 536 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 MRPL37Q9BZE1 423 aaKnown RBP15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 NELFAQ9H3P2 528 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 NTN4Q9HB63 628 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 ASIC5Q9NY37 505 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 RASD1Q9Y272 281 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 WNK2Q9Y3S1 2297 aa15.33■□□□□ 0.04
TSPAN3-208ENST00000560514 WNT9BO14905 357 aa15.32■□□□□ 0.04
TSPAN3-208ENST00000560514 BIRC5O15392 142 aa15.32■□□□□ 0.04
TSPAN3-208ENST00000560514 MPZL1O95297 269 aa15.32■□□□□ 0.04
TSPAN3-208ENST00000560514 CHRM4P08173 479 aa15.32■□□□□ 0.04
TSPAN3-208ENST00000560514 HKR1P10072 659 aa15.32■□□□□ 0.04
TSPAN3-208ENST00000560514 ALDH3B1P43353 468 aa15.32■□□□□ 0.04
TSPAN3-208ENST00000560514 CLDN8P56748 225 aa15.32■□□□□ 0.04
TSPAN3-208ENST00000560514 UBA52P62987 128 aaKnown RBP15.32■□□□□ 0.04
TSPAN3-208ENST00000560514 GSTA3Q16772 222 aa15.32■□□□□ 0.04
TSPAN3-208ENST00000560514 GKAP1Q5VSY0 366 aaPredicted RBP15.32■□□□□ 0.04
TSPAN3-208ENST00000560514 C1orf229Q6ZS94 237 aaPredicted RBP15.32■□□□□ 0.04
TSPAN3-208ENST00000560514 ZCCHC23Q6ZST2 131 aa15.32■□□□□ 0.04
TSPAN3-208ENST00000560514 MDP1Q86V88 176 aa15.32■□□□□ 0.04
TSPAN3-208ENST00000560514 NUDCD3Q8IVD9 361 aa15.32■□□□□ 0.04
TSPAN3-208ENST00000560514 GPR137CQ8N3F9 429 aa15.32■□□□□ 0.04
TSPAN3-208ENST00000560514 MREGQ8N565 214 aa15.32■□□□□ 0.04
TSPAN3-208ENST00000560514 SYT3Q9BQG1 590 aa15.32■□□□□ 0.04
TSPAN3-208ENST00000560514 DPY30Q9C005 99 aa15.32■□□□□ 0.04
TSPAN3-208ENST00000560514 SSU72Q9NP77 194 aaKnown RBP15.32■□□□□ 0.04
TSPAN3-208ENST00000560514 J3QLI3 93 aa15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 FAAHO00519 579 aa15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 RNASET2O00584 256 aaKnown RBP15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 SLC43A1O75387 559 aa15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 AVPP01185 164 aa15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 GSNP06396 782 aa15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 IL7RP16871 459 aa15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 GTF2E2P29084 291 aaKnown RBP15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 ARRB2P32121 409 aa15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 CHI3L1P36222 383 aaPredicted RBP15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 CLDN17P56750 224 aa15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 LMO4P61968 165 aa15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 RPS23P62266 143 aaKnown RBP15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 MRPS11P82912 194 aaKnown RBP15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 GALK2Q01415 458 aa15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 TRMT5Q32P41 509 aaKnown RBP15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 DCAF12L2Q5VW00 463 aa15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 OR4F3Q6IEY1 312 aa15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 ZDHHC22Q8N966 263 aa15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 ANKK1Q8NFD2 765 aa15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 TUBGCP3Q96CW5 907 aa15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 RAB39BQ96DA2 213 aa15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 ESM1Q9NQ30 184 aa15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 G6PC2Q9NQR9 355 aa15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 PPIAL4AQ9Y536 164 aa15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 CORINQ9Y5Q5 1042 aa15.31■□□□□ 0.04
TSPAN3-208ENST00000560514 A0A1W2PPW3 197 aa15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 A8MVM7 634 aa15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 TMEM229AB2RXF0 380 aa15.3■□□□□ 0.04
TSPAN3-208ENST00000560514 CPSF4O95639 269 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms