RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	WDFY1	Q8IWB7	410 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	GPR135	Q8IZ08	494 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	CDK20	Q8IZL9	346 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	SAMD12	Q8N8I0	201 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	OR6K6	Q8NGW6	343 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	OR1L3	Q8NH93	324 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	PHOSPHO1	Q8TCT1	267 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	KTI12	Q96EK9	354 aa	Predicted RBP	5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	TCTN2	Q96GX1	697 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	OR14A2	Q96R54	314 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	ABHD1	Q96SE0	405 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	ADO	Q96SZ5	270 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	GFI1	Q99684	422 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	TMEM43	Q9BTV4	400 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	NUDT9	Q9BW91	350 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	JAM3	Q9BX67	310 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	SLC25A18	Q9H1K4	315 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	DUSP15	Q9H1R2	295 aa	Predicted RBP	5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	NIPAL2	Q9H841	368 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	ENAM	Q9NRM1	1142 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	EXTL2	Q9UBQ6	330 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	KCNN3	Q9UGI6	736 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	ZNF222	Q9UK12	451 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	ICAM5	Q9UMF0	924 aa		5.26	□□□□□ -1.57
LRRC49-223	ENST00000560369	IRGM	A1A4Y4	181 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	TVP23A	A6NH52	213 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	PIN1P1	O15428	100 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	PLPP2	O43688	288 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	GDF9	O60383	454 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	ZNF354A	O60765	605 aa	Predicted RBP	5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	PRAMEF2	O60811	474 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	ICOSLG	O75144	302 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	SRF	P11831	508 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	PTHLH	P12272	177 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	ZNF3	P17036	446 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	ATF1	P18846	271 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	SSTR2	P30874	369 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	PPP3R1	P63098	170 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	RPL6	Q02878	288 aa	Known RBP	5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	ACSM3	Q53FZ2	586 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	TIGD3	Q6B0B8	471 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	DMKN	Q6E0U4	476 aa	Predicted RBP	5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	OR5M10	Q6IEU7	315 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	ULK3	Q6PHR2	472 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	TSSK4	Q6SA08	328 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	RTL4	Q6ZR62	310 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	PRSS45	Q7RTY3	260 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	MARCH3	Q86UD3	253 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	ZNF595	Q8IYB9	648 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	SLC25A45	Q8N413	288 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	DUSP18	Q8NEJ0	188 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	TOR1AIP2	Q8NFQ8	470 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	OR11H4	Q8NGC9	324 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	C1orf216	Q8TAB5	229 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	RGP1	Q92546	391 aa	Predicted RBP	5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	AKAP1	Q92667	903 aa	Known RBP eCLIP	5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	SGTB	Q96EQ0	304 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	AHCYL2	Q96HN2	611 aa	Known RBP	5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	ZNF285	Q96NJ3	590 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	GTPBP2	Q9BX10	602 aa	Known RBP	5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	TEX12	Q9BXU0	123 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	TRIM2	Q9C040	744 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369		Q9N2J8	555 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	PRDM9	Q9NQV7	894 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	GLTP	Q9NZD2	209 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	SERTAD3	Q9UJW9	196 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	GNG8	Q9UK08	70 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	MGAT4A	Q9UM21	535 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	AK6	Q9Y3D8	172 aa	Known RBP	5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	HRH3	Q9Y5N1	445 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	MYO7B	Q6PIF6	2116 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	ZDBF2	Q9HCK1	2354 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	LOC400499	M0QZD8	3231 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	PRRC2C	Q9Y520	2896 aa	Known RBP	5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	ACOD1	A6NK06	481 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	CCDC85C	A6NKD9	419 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	SLC22A31	A6NKX4	558 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369		I3L521	148 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	ZNF749	O43361	778 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	ORC5	O43913	435 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	SRPX2	O60687	465 aa	Predicted RBP	5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	SC5D	O75845	299 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	RPP14	O95059	124 aa	Known RBP	5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	NDUFB2	O95178	105 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	UTS2	O95399	124 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	DDAH2	O95865	285 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	AK1	P00568	194 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	MT-ND5	P03915	603 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	GIMD1	P0DJR0	217 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	SPI1	P17947	270 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	CXCL3	P19876	107 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	CD27	P26842	260 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	SLC6A6	P31641	620 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	CLDN12	P56749	244 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	PLA2G7	Q13093	441 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	SKP2	Q13309	424 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	TDG	Q13569	410 aa		5.25	□□□□□ -1.57
LRRC49-223	ENST00000560369	GPR176	Q14439	515 aa		5.25	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms