RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CLEC9AQ6UXN8 241 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 P2RY8Q86VZ1 359 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 SNX32Q86XE0 403 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 POU5F2Q8N7G0 328 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 TMEM45BQ96B21 275 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 TAMM41Q96BW9 452 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 SLC47A1Q96FL8 570 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 USB1Q9BQ65 265 aaKnown RBP10.97□□□□□ -0.65
SMAD3-208ENST00000558827 EMC6Q9BV81 110 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 SF3B5Q9BWJ5 86 aaKnown RBP10.97□□□□□ -0.65
SMAD3-208ENST00000558827 GSX2Q9BZM3 304 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 KAT8Q9H7Z6 458 aaKnown RBP10.97□□□□□ -0.65
SMAD3-208ENST00000558827 NANOGQ9H9S0 305 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 TMEM45AQ9NWC5 275 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 GMPR2Q9P2T1 348 aaKnown RBP10.97□□□□□ -0.65
SMAD3-208ENST00000558827 RASD1Q9Y272 281 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 ABCA2Q9BZC7 2435 aa10.97□□□□□ -0.65
SMAD3-208ENST00000558827 TRAV36DV7A0A075B6V5 113 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 PRORSD1PA6NEY8 169 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 KPNA4O00629 521 aaPredicted RBP10.96□□□□□ -0.65
SMAD3-208ENST00000558827 MRASO14807 208 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 SEC14L2O76054 403 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 FOSL1P15407 271 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 NQO1P15559 274 aaKnown RBP10.96□□□□□ -0.65
SMAD3-208ENST00000558827 PCBP3P57721 371 aaKnown RBP10.96□□□□□ -0.65
SMAD3-208ENST00000558827 REP15Q6BDI9 236 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 OR7E24Q6IFN5 339 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 ULK3Q6PHR2 472 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 KLHL17Q6TDP4 642 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 TMEM108Q6UXF1 575 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 TSPYL5Q86VY4 417 aaPredicted RBP10.96□□□□□ -0.65
SMAD3-208ENST00000558827 WDFY1Q8IWB7 410 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 LSMEM1Q8N8F7 131 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 POMGNT2Q8NAT1 580 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 OR6T1Q8NGN1 323 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 SLC26A7Q8TE54 656 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 DNAJA4Q8WW22 397 aaPredicted RBP10.96□□□□□ -0.65
SMAD3-208ENST00000558827 SLC38A4Q969I6 547 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 ZNF837Q96EG3 531 aaPredicted RBP10.96□□□□□ -0.65
SMAD3-208ENST00000558827 TXNDC15Q96J42 360 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 OXGR1Q96P68 337 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 MOGAT1Q96PD6 335 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 ARHGDIGQ99819 225 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 SAR1AQ9NR31 198 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 ZNF701Q9NV72 531 aaPredicted RBP10.96□□□□□ -0.65
SMAD3-208ENST00000558827 ARMCX1Q9P291 453 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 KLHL14Q9P2G3 628 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 B3GAT1Q9P2W7 334 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 TESQ9UGI8 421 aaKnown RBP10.96□□□□□ -0.65
SMAD3-208ENST00000558827 GMEB1Q9Y692 573 aa10.96□□□□□ -0.65
SMAD3-208ENST00000558827 A0A087WUJ7 227 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 A0A0B4J2E0 115 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 A0A1B0GX12 115 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 ZNF587BE7ETH6 402 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 C11orf98E9PRG8 122 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 ATP6V1G2-DDX39BF2Z307 99 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 MS4A18H0YCH9 400 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 M0R3G1 203 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 AIM2O14862 343 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 VAMP5O95183 116 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 BGLAPP02818 100 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 THY1P04216 161 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 CD247P20963 164 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 ACVR1BP36896 505 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 GZMMP51124 257 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 FABP6P51161 128 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 PRPS1P60891 318 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 IRX1P78414 480 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-208ENST00000558827 ARF1P84077 181 aaKnown RBP10.95□□□□□ -0.66
SMAD3-208ENST00000558827 ROR2Q01974 943 aaKnown RBP10.95□□□□□ -0.66
SMAD3-208ENST00000558827 TGFBR3Q03167 851 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 PMS2P3Q13401 168 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 TNK1Q13470 666 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 CYLC2Q14093 348 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-208ENST00000558827 VEZF1Q14119 521 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 TRMT5Q32P41 509 aaKnown RBP10.95□□□□□ -0.66
SMAD3-208ENST00000558827 MS4A18Q3C1V0 323 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 TBRG1Q3YBR2 411 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 ENTPD8Q5MY95 495 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 PHYHD1Q5SRE7 291 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 FAM69AQ5T7M9 428 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 METTL21CQ5VZV1 264 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 HMBOX1Q6NT76 420 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 KLHL24Q6TFL4 600 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 C6orf89Q6UWU4 347 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 WDR88Q6ZMY6 472 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 H1FNTQ75WM6 255 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-208ENST00000558827 BIVMQ86UB2 503 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 RANBP3LQ86VV4 465 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-208ENST00000558827 OR1K1Q8NGR3 316 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 STON2Q8WXE9 905 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 SLC35B4Q969S0 331 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 LRRC58Q96CX6 371 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 ECSITQ9BQ95 431 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 BDH2Q9BUT1 245 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 TRAF4Q9BUZ4 470 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-208ENST00000558827 ALG2Q9H553 416 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 SEC61A2Q9H9S3 476 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 MED29Q9NX70 200 aa10.95□□□□□ -0.66
SMAD3-208ENST00000558827 MOKQ9UQ07 419 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms