RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 PIK3C3Q8NEB9 887 aa13.77□□□□□ -0.21
LINC01220-201ENST00000558575 OR6S1Q8NH40 331 aa13.77□□□□□ -0.21
LINC01220-201ENST00000558575 TMEM255BQ8WV15 326 aa13.77□□□□□ -0.21
LINC01220-201ENST00000558575 LRMDAQ9H2I8 198 aa13.77□□□□□ -0.21
LINC01220-201ENST00000558575 BCO1Q9HAY6 547 aa13.77□□□□□ -0.21
LINC01220-201ENST00000558575 GLRX2Q9NS18 164 aa13.77□□□□□ -0.21
LINC01220-201ENST00000558575 SLC7A8Q9UHI5 535 aa13.77□□□□□ -0.21
LINC01220-201ENST00000558575 POMPQ9Y244 141 aa13.77□□□□□ -0.21
LINC01220-201ENST00000558575 HIVEP2P31629 2446 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 IGKV3D-15A0A087WSY6 115 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 AQP7P3A6NL99 342 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 A8MXE2 369 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 DVL2O14641 736 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 OR2T1O43869 369 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 EIF1BO60739 113 aaKnown RBP13.76□□□□□ -0.21
LINC01220-201ENST00000558575 CTAG2O75638 210 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 HEXAP06865 529 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 YES1P07947 543 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 INHBBP09529 407 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 RHCEP18577 417 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 GRPRP30550 384 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 AGTR1P30556 359 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 RASSF2P50749 326 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 SLC16A1P53985 500 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 ST3GAL3Q11203 375 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 SLC17A1Q14916 467 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 OTUD3Q5T2D3 398 aaPredicted RBP13.76□□□□□ -0.21
LINC01220-201ENST00000558575 TTC33Q6PID6 262 aaPredicted RBP13.76□□□□□ -0.21
LINC01220-201ENST00000558575 ZNF474Q6S9Z5 364 aaPredicted RBP13.76□□□□□ -0.21
LINC01220-201ENST00000558575 NHLRC1Q6VVB1 395 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 KDM8Q8N371 416 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 ZIC4Q8N9L1 334 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 ZNF610Q8N9Z0 462 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 ZHX1-C8orf76Q96EF9 292 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 NAA11Q9BSU3 229 aaPredicted RBP13.76□□□□□ -0.21
LINC01220-201ENST00000558575 TAPBPLQ9BX59 468 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 POLDIP3Q9BY77 421 aaKnown RBP13.76□□□□□ -0.21
LINC01220-201ENST00000558575 OPN3Q9H1Y3 402 aaPredicted RBP13.76□□□□□ -0.21
LINC01220-201ENST00000558575 NMNAT1Q9HAN9 279 aaPredicted RBP13.76□□□□□ -0.21
LINC01220-201ENST00000558575 GP6Q9HCN6 339 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 IL1RAPQ9NPH3 570 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 KCNJ16Q9NPI9 418 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 PLSCR4Q9NRQ2 329 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 C20orf141Q9NUB4 165 aa13.76□□□□□ -0.21
LINC01220-201ENST00000558575 ALPK2Q86TB3 2170 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 ZNF724A8MTY0 619 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 MS4A18H0YCH9 400 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 M0R082 166 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 EBAG9O00559 213 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 KPNA4O00629 521 aaPredicted RBP13.75□□□□□ -0.21
LINC01220-201ENST00000558575 DNASE1P24855 282 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 RBM34P42696 430 aaKnown RBP13.75□□□□□ -0.21
LINC01220-201ENST00000558575 ZNF74Q16587 644 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 MS4A18Q3C1V0 323 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 FBXL19-AS1Q494R0 122 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 MTX3Q5HYI7 312 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 EEF1A1P5Q5VTE0 462 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 TBPL2Q6SJ96 375 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 SLC46A3Q7Z3Q1 461 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 PIWIL3Q7Z3Z3 882 aaKnown RBP13.75□□□□□ -0.21
LINC01220-201ENST00000558575 LRRC17Q8N6Y2 441 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 OR6K3Q8NGY3 331 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 PFN4Q8NHR9 129 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 ZNF417Q8TAU3 575 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 PIGXQ8TBF5 258 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 TMEM239Q8WW34 195 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 UTP4Q969X6 686 aaKnown RBP13.75□□□□□ -0.21
LINC01220-201ENST00000558575 DHRS1Q96LJ7 313 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 ZNF587Q96SQ5 575 aaPredicted RBP13.75□□□□□ -0.21
LINC01220-201ENST00000558575 SEPHS2Q99611 448 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 EPYCQ99645 322 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 FUZQ9BT04 418 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 FNDC11Q9BVV2 318 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 SLC19A3Q9BZV2 496 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 KLHL9Q9P2J3 617 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 B3GAT1Q9P2W7 334 aa13.75□□□□□ -0.21
LINC01220-201ENST00000558575 A0A087WUU8 490 aa13.74□□□□□ -0.21
LINC01220-201ENST00000558575 PIP5K1CO60331 668 aa13.74□□□□□ -0.21
LINC01220-201ENST00000558575 CH25HO95992 272 aa13.74□□□□□ -0.21
LINC01220-201ENST00000558575 HPRP00739 348 aa13.74□□□□□ -0.21
LINC01220-201ENST00000558575 PLGP00747 810 aaPredicted RBP13.74□□□□□ -0.21
LINC01220-201ENST00000558575 MT-ND1P03886 318 aa13.74□□□□□ -0.21
LINC01220-201ENST00000558575 CD8BP10966 210 aa13.74□□□□□ -0.21
LINC01220-201ENST00000558575 MAGEA2P43356 314 aa13.74□□□□□ -0.21
LINC01220-201ENST00000558575 CTBP2P56545 445 aa13.74□□□□□ -0.21
LINC01220-201ENST00000558575 TRAM2Q15035 370 aa13.74□□□□□ -0.21
LINC01220-201ENST00000558575 CCDC121Q6ZUS5 278 aa13.74□□□□□ -0.21
LINC01220-201ENST00000558575 LUZP2Q86TE4 346 aa13.74□□□□□ -0.21
LINC01220-201ENST00000558575 MEX3DQ86XN8 651 aaKnown RBP13.74□□□□□ -0.21
LINC01220-201ENST00000558575 EPHX4Q8IUS5 362 aa13.74□□□□□ -0.21
LINC01220-201ENST00000558575 ADGRG5Q8IZF4 528 aa13.74□□□□□ -0.21
LINC01220-201ENST00000558575 SLC7A13Q8TCU3 470 aa13.74□□□□□ -0.21
LINC01220-201ENST00000558575 HS6ST2Q96MM7 605 aa13.74□□□□□ -0.21
LINC01220-201ENST00000558575 PIP5K1AQ99755 562 aa13.74□□□□□ -0.21
LINC01220-201ENST00000558575 PIGMQ9H3S5 423 aa13.74□□□□□ -0.21
LINC01220-201ENST00000558575 EMC9Q9Y3B6 208 aa13.74□□□□□ -0.21
LINC01220-201ENST00000558575 FLVCR1Q9Y5Y0 555 aa13.74□□□□□ -0.21
LINC01220-201ENST00000558575 CHD3Q12873 2000 aaKnown RBP13.74□□□□□ -0.21
LINC01220-201ENST00000558575 FREM1Q5H8C1 2179 aa13.73□□□□□ -0.21
LINC01220-201ENST00000558575 TRBV4-1A0A0J9YWV2 114 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms