RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CCNL2Q96S94 520 aaPredicted RBP2.2□□□□□ -2.06
SPG11-206ENST00000558093 NPAS2Q99743 824 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 PELOQ9BRX2 385 aaKnown RBP2.2□□□□□ -2.06
SPG11-206ENST00000558093 ALG12Q9BV10 488 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 DNTTIP1Q9H147 329 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 GAL3ST2Q9H3Q3 398 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 TMEM231Q9H6L2 316 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 ANKRA2Q9H9E1 313 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 C8orf4Q9NR00 106 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 PAQR5Q9NXK6 330 aaPredicted RBP2.2□□□□□ -2.06
SPG11-206ENST00000558093 RDH8Q9NYR8 311 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 AHSPQ9NZD4 102 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 CRLS1Q9UJA2 301 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 ENPP5Q9UJA9 477 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 NEU3Q9UQ49 428 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 MRPS33Q9Y291 106 aaKnown RBP2.2□□□□□ -2.06
SPG11-206ENST00000558093 IFT52Q9Y366 437 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 RHBDD3Q9Y3P4 386 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 L3MBTL1Q9Y468 752 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 MAD1L1Q9Y6D9 718 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 ROCK1Q13464 1354 aa2.2□□□□□ -2.06
SPG11-206ENST00000558093 ABCC4O15439 1325 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 ZMYM6O95789 1325 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 TRAV25A0A0B4J276 109 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 GOLGA8QA0A0J9YX86 632 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 A0A1W2PPV4 95 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 FBLL1A6NHQ2 334 aaKnown RBP2.19□□□□□ -2.06
SPG11-206ENST00000558093 A8MUI8 341 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 A8MXQ7 604 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 GPR171O14626 319 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 CASKO14936 926 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 MAGEB4O15481 346 aaPredicted RBP2.19□□□□□ -2.06
SPG11-206ENST00000558093 ADAM12O43184 909 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 RAMP1O60894 148 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 JCHAINP01591 159 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 HPNP05981 417 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 SLC2A3P11169 496 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 HNF1AP20823 631 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 MSR1P21757 451 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 CFL1P23528 166 aaKnown RBP2.19□□□□□ -2.06
SPG11-206ENST00000558093 CD40LGP29965 261 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 NTSP30990 170 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 RORAP35398 523 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 CRATP43155 626 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 GNPDA1P46926 289 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 HSPA13P48723 471 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 RPS15P62841 145 aaKnown RBP2.19□□□□□ -2.06
SPG11-206ENST00000558093 TNNC1P63316 161 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 MRPS6P82932 125 aaKnown RBP2.19□□□□□ -2.06
SPG11-206ENST00000558093 LRRC63Q05C16 580 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 ENPEPQ07075 957 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 SIGLEC14Q08ET2 396 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 DPYSL3Q14195 570 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 PIGHQ14442 188 aaPredicted RBP2.19□□□□□ -2.06
SPG11-206ENST00000558093 SSX2Q16385 188 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 TPD52L1Q16890 204 aaPredicted RBP2.19□□□□□ -2.06
SPG11-206ENST00000558093 TTMPQ5BVD1 217 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 CDKL4Q5MAI5 379 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 EOGTQ5NDL2 527 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 C6orf183Q5T699 404 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 PRAMEF5Q5TYX0 476 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 MLIPQ5VWP3 458 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 PRAMEF6Q5VXH4 476 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 PLCXD3Q63HM9 321 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 LEG1Q6P5S2 330 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 BTNL3Q6UXE8 466 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 ZNF562Q6V9R5 426 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 USP50Q70EL3 339 aaPredicted RBP2.19□□□□□ -2.06
SPG11-206ENST00000558093 EIF3MQ7L2H7 374 aaKnown RBP2.19□□□□□ -2.06
SPG11-206ENST00000558093 NLRP9Q7RTR0 991 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 NET1Q7Z628 596 aaPredicted RBP2.19□□□□□ -2.06
SPG11-206ENST00000558093 LINC00523Q86TU6 105 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 IFNEQ86WN2 208 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 VRK2Q86Y07 508 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 PLCZ1Q86YW0 608 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 CCDC36Q8IYA8 594 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 ST13P4Q8IZP2 240 aaPredicted RBP2.19□□□□□ -2.06
SPG11-206ENST00000558093 BCORP1Q8N888 145 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 MINDY2Q8NBR6 621 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 OR4K14Q8NGD5 310 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 OR4A15Q8NGL6 344 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 ENKURQ8TC29 256 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 DTX3LQ8TDB6 740 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 ING5Q8WYH8 240 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 DCUN1D4Q92564 292 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 OSTF1Q92882 214 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 RAB1CQ92928 201 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 ADIPOR1Q96A54 375 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 MCUR1Q96AQ8 359 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 SNF8Q96H20 258 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 ZNF514Q96K75 400 aaPredicted RBP2.19□□□□□ -2.06
SPG11-206ENST00000558093 PLEKHF1Q96S99 279 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 NPY6RQ99463 290 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 SLC29A1Q99808 456 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 TMEM246Q9BRR3 403 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 PARD6GQ9BYG4 376 aaPredicted RBP2.19□□□□□ -2.06
SPG11-206ENST00000558093 POTEKPQ9BYX7 375 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 ROGDIQ9GZN7 287 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 HDHD2Q9H0R4 259 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 CENPHQ9H3R5 247 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms