RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 HIST1H1CP16403 213 aaKnown RBP6.66□□□□□ -1.34
SPG11-204ENST00000557866 PRKCAP17252 672 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 HK1P19367 917 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 SLC2A5P22732 501 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 CXCR1P25024 350 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 UQCRC1P31930 480 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 NTF4P34130 210 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 CD79BP40259 229 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 NBL1P41271 181 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 CASP3P42574 277 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 MTNR1AP48039 350 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 ETV1P50549 477 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 LIMK1P53667 647 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 SUMO3P55854 103 aaPredicted RBP6.66□□□□□ -1.34
SPG11-204ENST00000557866 ERVK-25P63136 954 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 RAB40BQ12829 278 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 NFATC3Q12968 1075 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 ITGADQ13349 1161 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 IL10RAQ13651 578 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 CRMP1Q14194 572 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 SPCS2Q15005 226 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 SSX1Q16384 188 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 ARMCX4Q5H9R4 360 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 ZBTB37Q5TC79 503 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 NXNL2Q5VZ03 156 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 POMZP3Q6PJE2 187 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 IL20RBQ6UXL0 311 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 DPY19L2P2Q6ZN68 376 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 MEPCEQ7L2J0 689 aaKnown RBP6.66□□□□□ -1.34
SPG11-204ENST00000557866 GRINAQ7Z429 371 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 RPS19BP1Q86WX3 136 aaKnown RBP6.66□□□□□ -1.34
SPG11-204ENST00000557866 ERI1Q8IV48 349 aaKnown RBP6.66□□□□□ -1.34
SPG11-204ENST00000557866 ESX1Q8N693 406 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 C10orf53Q8N6V4 93 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 NANOGP1Q8N7R0 232 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 FADS6Q8N9I5 356 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 CYB561A3Q8NBI2 242 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 SLC37A3Q8NCC5 494 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 NPEPL1Q8NDH3 523 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 OR2M3Q8NG83 312 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 OR52E2Q8NGJ4 325 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 OR4K13Q8NH42 304 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 POC1BQ8TC44 478 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 RAB2BQ8WUD1 216 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 DNAJA3Q96EY1 480 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 PLEKHA8Q96JA3 519 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 OPALINQ96PE5 141 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 ERMAPQ96PL5 475 aaPredicted RBP6.66□□□□□ -1.34
SPG11-204ENST00000557866 DCUN1D5Q9BTE7 237 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 TEX12Q9BXU0 123 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 METTL7AQ9H8H3 244 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 GPN2Q9H9Y4 310 aaPredicted RBP6.66□□□□□ -1.34
SPG11-204ENST00000557866 NRIP3Q9NQ35 241 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 NANSQ9NR45 359 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 SEC14L4Q9UDX3 406 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 FBXL2Q9UKC9 423 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 YARS2Q9Y2Z4 477 aaKnown RBP6.66□□□□□ -1.34
SPG11-204ENST00000557866 ADAM18Q9Y3Q7 739 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 PCDHGB6Q9Y5F9 930 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 WIF1Q9Y5W5 379 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 U3KQE9 123 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 PCSK5Q92824 1860 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 RIIAD1A6NNX1 92 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 C21orf140B9A014 251 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 BLOC1S5-TXNDC5H3BN57 136 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 ARPC3O15145 178 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 RAB36O95755 333 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 HPP00738 406 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 CD14P08571 375 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 CELA3AP09093 270 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 FTH1P19P0C7X4 201 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 LIMS3P0CW19 117 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 LIMS4P0CW20 117 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 CCL3P10147 92 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 CD36P16671 472 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 IL11P20809 199 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 DLSTP36957 453 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 CDKN2AP42771 156 aaKnown RBP6.65□□□□□ -1.34
SPG11-204ENST00000557866 RPS5P46782 204 aaKnown RBP6.65□□□□□ -1.34
SPG11-204ENST00000557866 TMED10P49755 219 aaKnown RBP6.65□□□□□ -1.34
SPG11-204ENST00000557866 RGS6P49758 472 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 RPS15P62841 145 aaKnown RBP6.65□□□□□ -1.34
SPG11-204ENST00000557866 RPL18Q07020 188 aaKnown RBP6.65□□□□□ -1.34
SPG11-204ENST00000557866 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.65□□□□□ -1.34
SPG11-204ENST00000557866 FOXF1Q12946 379 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 CHAF1BQ13112 559 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 TSTQ16762 297 aaKnown RBP6.65□□□□□ -1.34
SPG11-204ENST00000557866 TMEM44Q2T9K0 475 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 PLPPR5Q32ZL2 321 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 KLHL22Q53GT1 634 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 SOWAHCQ53LP3 525 aaPredicted RBP6.65□□□□□ -1.34
SPG11-204ENST00000557866 SLC25A53Q5H9E4 307 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 C1orf140Q5VVS0 124 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 B3GNTL1Q67FW5 361 aaPredicted RBP6.65□□□□□ -1.34
SPG11-204ENST00000557866 H3F3CQ6NXT2 135 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 ARHGAP11AQ6P4F7 1023 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 TMEM81Q6P7N7 255 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 C19orf48Q6RUI8 117 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 FAM122BQ7Z309 247 aa6.65□□□□□ -1.34
SPG11-204ENST00000557866 SIRT6Q8N6T7 355 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms