RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 EIF4E2O60573 245 aaKnown RBP3.1□□□□□ -1.91
TDP1-217ENST00000557782 BMP15O95972 392 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 LALBAP00709 142 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 FSHBP01225 129 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 FGF1P05230 155 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 S100A6P06703 90 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 HOXD4P09016 255 aaPredicted RBP3.1□□□□□ -1.91
TDP1-217ENST00000557782 GABRR2P28476 465 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 OXTRP30559 389 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 CFHR2P36980 270 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 GPR1P46091 355 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 LIM2P55344 173 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 NDUFV3P56181 108 aaKnown RBP3.1□□□□□ -1.91
TDP1-217ENST00000557782 RPS14P62263 151 aaKnown RBP3.1□□□□□ -1.91
TDP1-217ENST00000557782 CHRNB3Q05901 458 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 ZNF33AQ06730 810 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 ZNF146Q15072 292 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 AANATQ16613 207 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 PTPN20Q4JDL3 420 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 ARMCX5Q6P1M9 558 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 GDPGP1Q6ZNW5 385 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 TRMT10CQ7L0Y3 403 aaKnown RBP3.1□□□□□ -1.91
TDP1-217ENST00000557782 ZNF771Q7L3S4 317 aaPredicted RBP3.1□□□□□ -1.91
TDP1-217ENST00000557782 GDPD3Q7L5L3 318 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 FAM122BQ7Z309 247 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 CMC1Q7Z7K0 106 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 PLA2G4DQ86XP0 818 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 CATSPER3Q86XQ3 398 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 NRMQ8IXM6 262 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 EID2Q8N6I1 236 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 ACOT4Q8N9L9 421 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 OR1S2Q8NGQ3 325 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 FLVCR1-AS1Q8TAF5 88 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 SLC7A13Q8TCU3 470 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 TAF15Q92804 592 aaKnown RBP eCLIP3.1□□□□□ -1.91
TDP1-217ENST00000557782 APH1AQ96BI3 265 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 ART5Q96L15 291 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 FOXN4Q96NZ1 517 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 OXGR1Q96P68 337 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 OR8B4Q96RC9 309 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 TBX15Q96SF7 602 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 MCHR1Q99705 422 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 RBM4BQ9BQ04 359 aaKnown RBP3.1□□□□□ -1.91
TDP1-217ENST00000557782 ECSITQ9BQ95 431 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 TMEM246Q9BRR3 403 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 LLPHQ9BRT6 129 aaKnown RBP3.1□□□□□ -1.91
TDP1-217ENST00000557782 TM2D1Q9BX74 207 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 OCR1Q9BZK8 76 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 ZYG11BQ9C0D3 744 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 NMUR2Q9GZQ4 415 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 OPN3Q9H1Y3 402 aaPredicted RBP3.1□□□□□ -1.91
TDP1-217ENST00000557782 MMP28Q9H239 520 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 NTN4Q9HB63 628 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 ZNF302Q9NR11 478 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 ZNF446Q9NWS9 450 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 HRASLS2Q9NWW9 162 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 ADA2Q9NZK5 511 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 RIMS3Q9UJD0 308 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 ZNF229Q9UJW7 825 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 SLC17A4Q9Y2C5 497 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 PLLPQ9Y342 182 aa3.1□□□□□ -1.91
TDP1-217ENST00000557782 MEIOCA2RUB1 952 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 E7EWF7 191 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 LOC110117498-PIK3R3F6TDL0 507 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 G3V3Y1 287 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 FAM72CH0Y354 149 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 H7C0C1 242 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 CCL21O00585 134 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 EEDO75530 441 aaKnown RBP3.09□□□□□ -1.91
TDP1-217ENST00000557782 NR2C1P13056 603 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 DEKP35659 375 aaKnown RBP3.09□□□□□ -1.91
TDP1-217ENST00000557782 SLC26A3P40879 764 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 PTGDSP41222 190 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 OR1D4P47884 311 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 TFPI2P48307 235 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 ALDH3B2P48448 385 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 KCNJ3P48549 501 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 SSR4P51571 173 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 GPX6P59796 221 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 ADARB1P78563 741 aaKnown RBP3.09□□□□□ -1.91
TDP1-217ENST00000557782 PAX2Q02962 417 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 LRRC63Q05C16 580 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 CCL14Q16627 93 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 MICAQ29983 383 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 PGGHGQ32M88 737 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 C18orf21Q32NC0 220 aaPredicted RBP3.09□□□□□ -1.91
TDP1-217ENST00000557782 XP32Q5T750 250 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 FAM72AQ5TYM5 149 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 FAM72DQ6L9T8 149 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 ASCL4Q6XD76 172 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 PID1Q7Z2X4 250 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 FAM72BQ86X60 149 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 ZBED8Q8IZ13 594 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 CMTM1Q8IZ96 169 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 PDIK1LQ8N165 341 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 OR2G2Q8NGZ5 317 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 OR56B4Q8NH76 319 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 LMO3Q8TAP4 145 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 C11orf45Q8TAV5 145 aa3.09□□□□□ -1.91
TDP1-217ENST00000557782 TCP10LQ8TDR4 215 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms