RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 FGF2P09038 288 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 MAPK3P27361 379 aaPredicted RBP10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 ACAA2P42765 397 aaKnown RBP10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 MAGEB1P43366 347 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 EMDP50402 254 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 NANOS3P60323 173 aaKnown RBP10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 ZNF273Q14593 569 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 RBMS2Q15434 407 aaKnown RBP10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 SLC6A19Q695T7 634 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 GSG1LQ6UXU4 331 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 STAC2Q6ZMT1 411 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 ABHD13Q7L211 337 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 HSD17B13Q7Z5P4 300 aaPredicted RBP10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 GLB1L2Q8IW92 636 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 NPEPL1Q8NDH3 523 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 OR52B4Q8NGK2 314 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 SP7Q8TDD2 431 aaPredicted RBP10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 RGP1Q92546 391 aaPredicted RBP10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 SMARCD2Q92925 531 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 SLC22A18Q96BI1 424 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 OR1F2PQ96R84 312 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 NMNAT3Q96T66 252 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 LDAHQ9H6V9 325 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 LYRM4Q9HD34 91 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 DNAJB12Q9NXW2 375 aaKnown RBP10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 FXYD6-FXYD2A0A087WZ82 144 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 RBBP9O75884 186 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 GLSO94925 669 aaPredicted RBP10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 GPR75O95800 540 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 VSIG10L2P0DP72 767 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 MAZP56270 477 aaKnown RBP10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 GMFBP60983 142 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 RPS15P62841 145 aaKnown RBP10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 PRICKLE4Q2TBC4 344 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 STPG1Q5TH74 334 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 ULK3Q6PHR2 472 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 LRRN1Q6UXK5 716 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 LINC00114Q6XXX2 140 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 PDZD9Q8IXQ8 264 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 DND1Q8IYX4 353 aaKnown RBP10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 BVESQ8NE79 360 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 OR2A5Q96R48 311 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 CFHR5Q9BXR6 569 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 FXYD6Q9H0Q3 95 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 CAPN10Q9HC96 672 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 TMEM74BQ9NUR3 256 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 SERGEFQ9UGK8 458 aa10.82□□□□□ -0.68
VIPAS39-211ENST00000557658 A0A1W2PP55 124 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 OR6C68A6NDL8 312 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 ANXA2P2A6NMY6 339 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 F5H5P2 479 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 PSMD9O00233 223 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 GNB5O14775 395 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 ADAM11O75078 769 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 NKX2-2O95096 273 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 PROS1P07225 676 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 TACSTD2P09758 323 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 PDGFRLQ15198 375 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 Q499Y3 187 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 DNM1P46Q6ZS02 220 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 SLC36A1Q7Z2H8 476 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 FAM220AQ7Z4H9 259 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 CAMKVQ8NCB2 501 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 OR5M1Q8NGP8 315 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 ZDHHC1Q8WTX9 485 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 NMNAT2Q9BZQ4 307 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 LMAN2LQ9H0V9 348 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 TSPAN10Q9H1Z9 355 aaPredicted RBP10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 SRMSQ9H3Y6 488 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 RWDD3Q9Y3V2 267 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 A0A1B0GVT2 93 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 LGALS8O00214 317 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 ARPC3O15145 178 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 GLCEO94923 617 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 SIX6O95475 246 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 RLN1P04808 185 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 CT62P0C5K7 136 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 ZNF35P13682 527 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 ITPKBP27987 946 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 GRPRP30550 384 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 WASP42768 502 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 GPR143P51810 404 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 PRMT2P55345 433 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 PCGF3Q3KNV8 242 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 VITQ6UXI7 678 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 CFAP77Q6ZQR2 320 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 ZNF550Q7Z398 422 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 PAWRQ96IZ0 340 aaKnown RBP10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 MS4A7Q9GZW8 240 aaPredicted RBP10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 RXFP3Q9NSD7 469 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 WSB2Q9NYS7 404 aaPredicted RBP10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 TAS2R8Q9NYW2 309 aa10.81□□□□□ -0.68
VIPAS39-211ENST00000557658 H7C417 338 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 CTSVO60911 334 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 AQP8O94778 261 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 RPP14O95059 124 aaKnown RBP10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 ADH1BP00325 375 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 EGFP01133 1207 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 CSF1P09603 554 aa10.8□□□□□ -0.68
VIPAS39-211ENST00000557658 IFI6P09912 130 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms