RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 PUDPQ08623 228 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 FHL1Q13642 323 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 KEAP1Q14145 624 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 LY6DQ14210 128 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 GINS1Q14691 196 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 CTU2Q2VPK5 515 aaKnown RBP9.89□□□□□ -0.83
TMEM260-208ENST00000555905 GXYLT1Q4G148 440 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 ALG10Q5BKT4 473 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 CLEC12AQ5QGZ9 265 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 TMEM225Q6GV28 225 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 SLC27A4Q6P1M0 643 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 PAQR6Q6TCH4 344 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 DPY19L2P2Q6ZN68 376 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 PM20D2Q8IYS1 436 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 GHDCQ8N2G8 530 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 ADPRHL1Q8NDY3 354 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 OR2T33Q8NG76 320 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 MOSPD2Q8NHP6 518 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 TFAP2CQ92754 450 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 CPNE4Q96A23 557 aaPredicted RBP9.89□□□□□ -0.83
TMEM260-208ENST00000555905 ADGRG7Q96K78 797 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 APOL4Q9BPW4 351 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 IFT27Q9BW83 186 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 PRRG3Q9BZD7 231 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 PLA2G12AQ9BZM1 189 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 SEC14L4Q9UDX3 406 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 IL20RAQ9UHF4 553 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 BAIAP2Q9UQB8 552 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 CAMK2AQ9UQM7 478 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 GMPPBQ9Y5P6 360 aa9.89□□□□□ -0.83
TMEM260-208ENST00000555905 DNAJC13O75165 2243 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 BOD1L1Q8NFC6 3051 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 MAP1BP46821 2468 aaKnown RBP9.88□□□□□ -0.83
TMEM260-208ENST00000555905 A0A1B0GTH9 108 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 AQP7P3A6NL99 342 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 C11orf98E9PRG8 122 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 HMGN1P05114 100 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 TSPAN19P0C672 248 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 EPHA2P29317 976 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 NOS3P29474 1203 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 GGT2P36268 569 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 GIPRP48546 466 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 RPS6KA3P51812 740 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 AGFG1P52594 562 aaKnown RBP9.88□□□□□ -0.83
TMEM260-208ENST00000555905 FXYD6P3P58550 94 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 CDC42P60953 191 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 CDK5Q00535 292 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 ZP4Q12836 540 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 IL18R1Q13478 541 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 TMEM236Q5W0B7 351 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 ZNF324BQ6AW86 544 aaPredicted RBP9.88□□□□□ -0.83
TMEM260-208ENST00000555905 CASP12Q6UXS9 341 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 IGFN1Q86VF2 1251 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 DEPDC4Q8N2C3 294 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 IQCF1Q8N6M8 205 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 TMEM99Q8N816 258 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 SETD9Q8NE22 299 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 OR8D4Q8NGM9 314 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 FAR1Q8WVX9 515 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 WDYHV1Q96HA8 205 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 HRASLS5Q96KN8 279 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 SLC38A2Q96QD8 506 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 SRXN1Q9BYN0 137 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 SLC25A19Q9HC21 320 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 INIPQ9NRY2 104 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 IMPAD1Q9NX62 359 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 TAS2R5Q9NYW4 299 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 TNFRSF10DQ9UBN6 386 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 MCTS1Q9ULC4 181 aaKnown RBP9.88□□□□□ -0.83
TMEM260-208ENST00000555905 NDRG4Q9ULP0 352 aaKnown RBP9.88□□□□□ -0.83
TMEM260-208ENST00000555905 RASD1Q9Y272 281 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 PKD1L2Q7Z442 2459 aa9.88□□□□□ -0.83
TMEM260-208ENST00000555905 TPRP12270 2363 aaKnown RBP9.87□□□□□ -0.83
TMEM260-208ENST00000555905 A0A1W2PNV4 684 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 A0A1W2PRG6 482 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 TTLL8A6PVC2 850 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 MCIDASD6RGH6 385 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 NPIPA2E9PIF3 369 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 NPIPA3F8WFD2 350 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 MS4A18H0YCH9 400 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 BHLHE40O14503 412 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 IDH3BO43837 385 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 VAMP5O95183 116 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 PPP1R3DO95685 299 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 F13BP05160 661 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 CD14P08571 375 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 ACADSP16219 412 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 GRK5P34947 590 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 DAP3P51398 398 aaKnown RBP9.87□□□□□ -0.83
TMEM260-208ENST00000555905 CTXN1P60606 82 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 H3F3AP84243 136 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 HSF1Q00613 529 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 MYBPC1Q00872 1141 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 C1DQ13901 141 aaKnown RBP9.87□□□□□ -0.83
TMEM260-208ENST00000555905 SF3B4Q15427 424 aaKnown RBP eCLIP9.87□□□□□ -0.835e-6■■■■□ 26.7
TMEM260-208ENST00000555905 C3AR1Q16581 482 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 ZNF239Q16600 458 aaKnown RBP9.87□□□□□ -0.83
TMEM260-208ENST00000555905 PGGHGQ32M88 737 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 MS4A18Q3C1V0 323 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 SLX4IPQ5VYV7 408 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms