RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 LGALS3BPQ08380 585 aa16.15■□□□□ 0.18
NEDD1-208ENST00000555806 SPOCK1Q08629 439 aa16.15■□□□□ 0.18
NEDD1-208ENST00000555806 C1DQ13901 141 aaKnown RBP16.15■□□□□ 0.18
NEDD1-208ENST00000555806 CYLC2Q14093 348 aaPredicted RBP16.15■□□□□ 0.18
NEDD1-208ENST00000555806 NET1Q7Z628 596 aaPredicted RBP16.15■□□□□ 0.18
NEDD1-208ENST00000555806 PATL1Q86TB9 770 aaKnown RBP16.15■□□□□ 0.18
NEDD1-208ENST00000555806 WDR31Q8NA23 367 aa16.15■□□□□ 0.18
NEDD1-208ENST00000555806 SLC26A7Q8TE54 656 aa16.15■□□□□ 0.18
NEDD1-208ENST00000555806 TRMT61AQ96FX7 289 aaKnown RBP16.15■□□□□ 0.18
NEDD1-208ENST00000555806 OXGR1Q96P68 337 aa16.15■□□□□ 0.18
NEDD1-208ENST00000555806 EPYCQ99645 322 aa16.15■□□□□ 0.18
NEDD1-208ENST00000555806 MCHR1Q99705 422 aa16.15■□□□□ 0.18
NEDD1-208ENST00000555806 ARHGDIGQ99819 225 aa16.15■□□□□ 0.18
NEDD1-208ENST00000555806 FAIMQ9NVQ4 179 aa16.15■□□□□ 0.18
NEDD1-208ENST00000555806 KLHL14Q9P2G3 628 aa16.15■□□□□ 0.18
NEDD1-208ENST00000555806 A0A087WUJ7 227 aa16.14■□□□□ 0.17
NEDD1-208ENST00000555806 OR6C65A6NJZ3 312 aa16.14■□□□□ 0.17
NEDD1-208ENST00000555806 SMAD7O15105 426 aaKnown RBP16.14■□□□□ 0.17
NEDD1-208ENST00000555806 TPST2O60704 377 aa16.14■□□□□ 0.17
NEDD1-208ENST00000555806 LGI1O95970 557 aa16.14■□□□□ 0.17
NEDD1-208ENST00000555806 WNT11O96014 354 aa16.14■□□□□ 0.17
NEDD1-208ENST00000555806 CDKN1AP38936 164 aa16.14■□□□□ 0.17
NEDD1-208ENST00000555806 PRPS1P60891 318 aa16.14■□□□□ 0.17
NEDD1-208ENST00000555806 SLC25A3Q00325 362 aa16.14■□□□□ 0.17
NEDD1-208ENST00000555806 GUCY1A3Q02108 690 aa16.14■□□□□ 0.17
NEDD1-208ENST00000555806 KLF10Q13118 480 aa16.14■□□□□ 0.17
NEDD1-208ENST00000555806 MAPRE2Q15555 327 aa16.14■□□□□ 0.17
NEDD1-208ENST00000555806 DUSP7Q16829 419 aa16.14■□□□□ 0.17
NEDD1-208ENST00000555806 PGGHGQ32M88 737 aa16.14■□□□□ 0.17
NEDD1-208ENST00000555806 HIKESHIQ53FT3 197 aa16.14■□□□□ 0.17
NEDD1-208ENST00000555806 INTS11Q5TA45 600 aaKnown RBP16.14■□□□□ 0.17
NEDD1-208ENST00000555806 CGB2Q6NT52 195 aa16.14■□□□□ 0.17
NEDD1-208ENST00000555806 DEPDC4Q8N2C3 294 aa16.14■□□□□ 0.17
NEDD1-208ENST00000555806 C10orf53Q8N6V4 93 aa16.14■□□□□ 0.17
NEDD1-208ENST00000555806 GPR32P1Q8NGA4 272 aa16.14■□□□□ 0.17
NEDD1-208ENST00000555806 VANGL1Q8TAA9 524 aaPredicted RBP16.14■□□□□ 0.17
NEDD1-208ENST00000555806 B3GALT5Q9Y2C3 310 aa16.14■□□□□ 0.17
NEDD1-208ENST00000555806 CADP27708 2225 aa16.14■□□□□ 0.17
NEDD1-208ENST00000555806 USF3Q68DE3 2245 aa16.13■□□□□ 0.17
NEDD1-208ENST00000555806 MRASO14807 208 aa16.13■□□□□ 0.17
NEDD1-208ENST00000555806 UPK3AO75631 287 aa16.13■□□□□ 0.17
NEDD1-208ENST00000555806 NQO1P15559 274 aaKnown RBP16.13■□□□□ 0.17
NEDD1-208ENST00000555806 CDH12P55289 794 aa16.13■□□□□ 0.17
NEDD1-208ENST00000555806 MFSD13AQ14CX5 517 aa16.13■□□□□ 0.17
NEDD1-208ENST00000555806 NRF1Q16656 503 aa16.13■□□□□ 0.17
NEDD1-208ENST00000555806 VMACQ2NL98 169 aa16.13■□□□□ 0.17
NEDD1-208ENST00000555806 REP15Q6BDI9 236 aa16.13■□□□□ 0.17
NEDD1-208ENST00000555806 NANOGP8Q6NSW7 305 aa16.13■□□□□ 0.17
NEDD1-208ENST00000555806 HMBOX1Q6NT76 420 aa16.13■□□□□ 0.17
NEDD1-208ENST00000555806 CLEC9AQ6UXN8 241 aa16.13■□□□□ 0.17
NEDD1-208ENST00000555806 Q71RC1 249 aaPredicted RBP16.13■□□□□ 0.17
NEDD1-208ENST00000555806 H1FNTQ75WM6 255 aaPredicted RBP16.13■□□□□ 0.17
NEDD1-208ENST00000555806 CIARTQ8N365 385 aaPredicted RBP16.13■□□□□ 0.17
NEDD1-208ENST00000555806 COX4I2Q96KJ9 171 aa16.13■□□□□ 0.17
NEDD1-208ENST00000555806 SH3GL1Q99961 368 aa16.13■□□□□ 0.17
NEDD1-208ENST00000555806 ASPNQ9BXN1 380 aa16.13■□□□□ 0.17
NEDD1-208ENST00000555806 NANOGQ9H9S0 305 aa16.13■□□□□ 0.17
NEDD1-208ENST00000555806 SAR1AQ9NR31 198 aa16.13■□□□□ 0.17
NEDD1-208ENST00000555806 B3GAT1Q9P2W7 334 aa16.13■□□□□ 0.17
NEDD1-208ENST00000555806 RCE1Q9Y256 329 aa16.13■□□□□ 0.17
NEDD1-208ENST00000555806 CPSF4LA6NMK7 179 aaKnown RBP16.12■□□□□ 0.17
NEDD1-208ENST00000555806 BBIP1A8MTZ0 92 aa16.12■□□□□ 0.17
NEDD1-208ENST00000555806 OVOL3O00110 214 aa16.12■□□□□ 0.17
NEDD1-208ENST00000555806 AKAP8O43823 692 aaKnown RBP16.12■□□□□ 0.17
NEDD1-208ENST00000555806 FMO6PO60774 539 aa16.12■□□□□ 0.17
NEDD1-208ENST00000555806 FZD7O75084 574 aa16.12■□□□□ 0.17
NEDD1-208ENST00000555806 SLC43A1O75387 559 aa16.12■□□□□ 0.17
NEDD1-208ENST00000555806 C8BP07358 591 aa16.12■□□□□ 0.17
NEDD1-208ENST00000555806 UBE2NP61088 152 aaKnown RBP16.12■□□□□ 0.17
NEDD1-208ENST00000555806 TBRG1Q3YBR2 411 aa16.12■□□□□ 0.17
NEDD1-208ENST00000555806 RABL3Q5HYI8 236 aa16.12■□□□□ 0.17
NEDD1-208ENST00000555806 COQ5Q5HYK3 327 aa16.12■□□□□ 0.17
NEDD1-208ENST00000555806 SWT1Q5T5J6 900 aaKnown RBP16.12■□□□□ 0.17
NEDD1-208ENST00000555806 ZNF613Q6PF04 617 aa16.12■□□□□ 0.17
NEDD1-208ENST00000555806 SNX32Q86XE0 403 aa16.12■□□□□ 0.17
NEDD1-208ENST00000555806 UEVLDQ8IX04 471 aa16.12■□□□□ 0.17
NEDD1-208ENST00000555806 OR6T1Q8NGN1 323 aa16.12■□□□□ 0.17
NEDD1-208ENST00000555806 OR1K1Q8NGR3 316 aa16.12■□□□□ 0.17
NEDD1-208ENST00000555806 TAMM41Q96BW9 452 aa16.12■□□□□ 0.17
NEDD1-208ENST00000555806 LRRC58Q96CX6 371 aa16.12■□□□□ 0.17
NEDD1-208ENST00000555806 ECSITQ9BQ95 431 aa16.12■□□□□ 0.17
NEDD1-208ENST00000555806 TRAF4Q9BUZ4 470 aaPredicted RBP16.12■□□□□ 0.17
NEDD1-208ENST00000555806 LINC00470Q9BZP3 86 aa16.12■□□□□ 0.17
NEDD1-208ENST00000555806 CORINQ9Y5Q5 1042 aa16.12■□□□□ 0.17
NEDD1-208ENST00000555806 FAM171A2A8MVW0 826 aa16.11■□□□□ 0.17
NEDD1-208ENST00000555806 E7EQL1 145 aa16.11■□□□□ 0.17
NEDD1-208ENST00000555806 CHP2O43745 196 aa16.11■□□□□ 0.17
NEDD1-208ENST00000555806 BGLAPP02818 100 aa16.11■□□□□ 0.17
NEDD1-208ENST00000555806 CD247P20963 164 aa16.11■□□□□ 0.17
NEDD1-208ENST00000555806 ROR2Q01974 943 aaKnown RBP16.11■□□□□ 0.17
NEDD1-208ENST00000555806 NPTX1Q15818 432 aa16.11■□□□□ 0.17
NEDD1-208ENST00000555806 ENTPD8Q5MY95 495 aa16.11■□□□□ 0.17
NEDD1-208ENST00000555806 C1QTNF12Q5T7M4 302 aa16.11■□□□□ 0.17
NEDD1-208ENST00000555806 AGAP6Q5VW22 663 aa16.11■□□□□ 0.17
NEDD1-208ENST00000555806 LINGO2Q7L985 606 aa16.11■□□□□ 0.17
NEDD1-208ENST00000555806 DTX2Q86UW9 622 aa16.11■□□□□ 0.17
NEDD1-208ENST00000555806 GPR137CQ8N3F9 429 aa16.11■□□□□ 0.17
NEDD1-208ENST00000555806 ADPRHL1Q8NDY3 354 aa16.11■□□□□ 0.17
NEDD1-208ENST00000555806 OR8J3Q8NGG0 315 aa16.11■□□□□ 0.17
NEDD1-208ENST00000555806 OR6S1Q8NH40 331 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms