RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ROBO4Q8WZ75 1007 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 OXGR1Q96P68 337 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 TM9SF2Q99805 663 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 NIPSNAP1Q9BPW8 284 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 RNF122Q9H9V4 155 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 TAS2R5Q9NYW4 299 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 KLHL9Q9P2J3 617 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 CLCF1Q9UBD9 225 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 ENOPH1Q9UHY7 261 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 SIGLEC7Q9Y286 467 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 POFUT2Q9Y2G5 429 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 KALRNO60229 2985 aa11.14□□□□□ -0.63
SHMT2-221ENST00000555773 A0A1W2PNV4 684 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 E9PLN8 166 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 GPR171O14626 319 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 NDUFB2O95178 105 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 HPRP00739 348 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 PRB1P04280 392 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 ALPLP05186 524 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 STSP08842 583 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 ADORA3P0DMS8 318 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 OSMP13725 252 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 AHCYP23526 432 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 UQCRC1P31930 480 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 TIMP3P35625 211 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 ALDH3A2P51648 485 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 SLC16A1P53985 500 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 FHL1Q13642 323 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 DAG1Q14118 895 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 SLC17A1Q14916 467 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 POU4F3Q15319 338 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 RFX4Q33E94 735 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 OGFRL1Q5TC84 451 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-221ENST00000555773 EEF1A1P5Q5VTE0 462 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 TMEM211Q6ICI0 200 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 SMARCD3Q6STE5 483 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 B3GNT6Q6ZMB0 384 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 ATCAYQ86WG3 371 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 MEX3DQ86XN8 651 aaKnown RBP11.13□□□□□ -0.63
SHMT2-221ENST00000555773 EPHX4Q8IUS5 362 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 CCDC103Q8IW40 242 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 MCEMP1Q8IX19 187 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 PARP8Q8N3A8 854 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 OR13C2Q8NGS9 318 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 RNF128Q8TEB7 428 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 ZFP3Q96NJ6 502 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 VKORC1Q9BQB6 163 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 TACO1Q9BSH4 297 aaKnown RBP11.13□□□□□ -0.63
SHMT2-221ENST00000555773 SMURF2Q9HAU4 748 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 PAPOLBQ9NRJ5 636 aaKnown RBP11.13□□□□□ -0.63
SHMT2-221ENST00000555773 IL20Q9NYY1 176 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 NOX1Q9Y5S8 564 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 NBASA2RRP1 2371 aa11.13□□□□□ -0.63
SHMT2-221ENST00000555773 IGKV3D-15A0A087WSY6 115 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 TRAV27A0A087WT01 109 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 IGHV3-15A0A0B4J1V0 119 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 TRGV8A0A0C4DH27 118 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 MBD3L4A6NDZ8 208 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-221ENST00000555773 MBD3L3A6NE82 208 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-221ENST00000555773 MBD3L5A6NJ08 208 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-221ENST00000555773 ZNF724A8MTY0 619 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 ZNF814B7Z6K7 855 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 EI24O14681 340 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 RNF13O43567 381 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 C1QL1O75973 258 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 AQP8O94778 261 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 TGM6O95932 706 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 CRHP06850 196 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 YES1P07947 543 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 ZNF43P17038 809 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 CDH2P19022 906 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-221ENST00000555773 IGFBP5P24593 272 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 AQP2P41181 271 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 CA7P43166 264 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 RAD23AP54725 363 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 ESRRGP62508 458 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 RPL18Q07020 188 aaKnown RBP11.12□□□□□ -0.63
SHMT2-221ENST00000555773 RASGEF1BQ0VAM2 473 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 C1DQ13901 141 aaKnown RBP11.12□□□□□ -0.63
SHMT2-221ENST00000555773 EIF2S3LQ2VIR3 472 aaKnown RBP11.12□□□□□ -0.63
SHMT2-221ENST00000555773 ALG10Q5BKT4 473 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 LPCAT4Q643R3 524 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 ABLIM2Q6H8Q1 611 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 RTL6Q6ICC9 239 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 KLHL17Q6TDP4 642 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 RPTNQ6XPR3 784 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 DPY19L2P2Q6ZN68 376 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 ZNF620Q6ZNG0 422 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 ANKK1Q8NFD2 765 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 MBD3L2Q8NHZ7 208 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-221ENST00000555773 MAGEE2Q8TD90 523 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-221ENST00000555773 SLC29A1Q99808 456 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 TTYH2Q9BSA4 534 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 VCXQ9H320 206 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 VCX3BQ9H321 246 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 MCCC2Q9HCC0 563 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 INIPQ9NRY2 104 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 KRT84Q9NSB2 600 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 EMC3Q9P0I2 261 aa11.12□□□□□ -0.63
SHMT2-221ENST00000555773 REV1Q9UBZ9 1251 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms