RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 AMIGO2Q86SJ2 522 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 ATP6V1C2Q8NEY4 427 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 KBTBD8Q8NFY9 601 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 OR5D16Q8NGK9 328 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 OIT3Q8WWZ8 545 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 RAB8BQ92930 207 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 C7orf34Q96L11 122 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 RDH12Q96NR8 316 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 ZNF300Q96RE9 604 aaPredicted RBP9.36□□□□□ -0.91
SHMT2-215ENST00000554656 ZNF347Q96SE7 839 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 PSD2Q9BQI7 771 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 SAP130Q9H0E3 1048 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 EVA1AQ9H8M9 152 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 PRSS50Q9UI38 385 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 RAB26Q9ULW5 256 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 LRCH1Q9Y2L9 728 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 RNF115Q9Y4L5 304 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 V9GYQ6 96 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 DPRXA6NFQ7 191 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 SMAD9O15198 467 aaKnown RBP9.35□□□□□ -0.91
SHMT2-215ENST00000554656 TMCC2O75069 709 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 NDUFS7O75251 213 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 BCAS1O75363 584 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-215ENST00000554656 HPRP00739 348 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 ADAP00813 363 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 CD247P20963 164 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 ADH6P28332 368 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 CDKN1AP38936 164 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 CASP9P55211 416 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 RPS4XP62701 263 aaKnown RBP9.35□□□□□ -0.91
SHMT2-215ENST00000554656 PLAURQ03405 335 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 BSPH1Q075Z2 132 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 SELENBP1Q13228 472 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 SKP2Q13309 424 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 QPRTQ15274 297 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 TAF11Q15544 211 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 ZSWIM7Q19AV6 140 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 PGGHGQ32M88 737 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 ZNF672Q499Z4 452 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-215ENST00000554656 IQCCQ4KMZ1 466 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 TMEM201Q5SNT2 666 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 PDZK1Q5T2W1 519 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 GTF2IRD2BQ6EKJ0 949 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 OR2T5Q6IEZ7 315 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.35□□□□□ -0.91
SHMT2-215ENST00000554656 C16orf62Q7Z3J2 963 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 GTF2IRD2Q86UP8 949 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 HIPK1Q86Z02 1210 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 ZNF614Q8N883 585 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 ZNF527Q8NB42 609 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 OR2T29Q8NH02 315 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 OR5K1Q8NHB7 308 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 PROX1Q92786 737 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 KISS1RQ969F8 398 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-215ENST00000554656 MRGPRX4Q96LA9 322 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 SDF2Q99470 211 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 QRSL1Q9H0R6 528 aaKnown RBP9.35□□□□□ -0.91
SHMT2-215ENST00000554656 GABARAPL1Q9H0R8 117 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 SEMA6AQ9H2E6 1030 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 SLC38A1Q9H2H9 487 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 Q9H521 79 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 MTHFD2LQ9H903 347 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-215ENST00000554656 BCO1Q9HAY6 547 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 NTN4Q9HB63 628 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 GP6Q9HCN6 339 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 IFT52Q9Y366 437 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 MAGED1Q9Y5V3 778 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-215ENST00000554656 STAB1Q9NY15 2570 aa9.35□□□□□ -0.91
SHMT2-215ENST00000554656 RNF223E7ERA6 249 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 GNGT2O14610 69 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 RAMP1O60894 148 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 STX11O75558 287 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 LYZL6O75951 148 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 CD8AP01732 235 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 IGHV4-39P01824 125 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 IFNW1P05000 195 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 FESP07332 822 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 CD3EP07766 207 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 YES1P07947 543 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 CHRM4P08173 479 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 PABPC4LP0CB38 370 aaKnown RBP9.34□□□□□ -0.91
SHMT2-215ENST00000554656 UBL4AP11441 157 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 UQCRBP14927 111 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 IL32P24001 234 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 AQP1P29972 269 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 PRKAR1BP31321 381 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 ACVR1BP36896 505 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 OR3A2P47893 321 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 ARHGDIAP52565 204 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 AQP4P55087 323 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 RAC3P60763 192 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 VLDLRP98155 873 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 PPP2R2BQ00005 443 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 EPS8Q12929 822 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 CLEC12BQ2HXU8 276 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 GPAT3Q53EU6 434 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 DHRS4L2Q6PKH6 230 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 DNM1P46Q6ZS02 220 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 Q6ZT83 130 aa9.34□□□□□ -0.91
SHMT2-215ENST00000554656 BHLHA15Q7RTS1 189 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms