RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 UQCC2Q9BRT2 126 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 THAP7Q9BT49 309 aaPredicted RBP3.12□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF436Q9C0F3 470 aaPredicted RBP3.12□□□□□ -1.91
SEC23A-207ENST00000554615 FN3KRPQ9HA64 309 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 TM7SF3Q9NS93 570 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 UCKL1Q9NWZ5 548 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 FAM206AQ9NX38 181 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 FRRS1LQ9P0K9 344 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 TBC1D29Q9UFV1 150 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 TAC3Q9UHF0 121 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 GLS2Q9UI32 602 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 CD84Q9UIB8 345 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 YARS2Q9Y2Z4 477 aaKnown RBP3.12□□□□□ -1.91
SEC23A-207ENST00000554615 ANTXRLA6NF34 631 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 WWP2O00308 870 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 PRRG1O14668 218 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 FGF17O60258 216 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 SEC24DO94855 1032 aaPredicted RBP3.11□□□□□ -1.91
SEC23A-207ENST00000554615 IRF1P10914 325 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 POLR2CP19387 275 aaPredicted RBP3.11□□□□□ -1.91
SEC23A-207ENST00000554615 CXCL2P19875 107 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 CERS1P27544 350 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 S100A5P33763 92 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 MC3RP41968 323 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 OR3A3P47888 321 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 CLK1P49759 484 aaKnown RBP3.11□□□□□ -1.91
SEC23A-207ENST00000554615 EIF2B2P49770 351 aaKnown RBP3.11□□□□□ -1.91
SEC23A-207ENST00000554615 P2RX1P51575 399 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 BLVRAP53004 296 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 SIRPAP78324 504 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 C1DQ13901 141 aaKnown RBP3.11□□□□□ -1.91
SEC23A-207ENST00000554615 FZD2Q14332 565 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 TBRG1Q3YBR2 411 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 VWA2Q5GFL6 755 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 MRPL2Q5T653 305 aaKnown RBP3.11□□□□□ -1.91
SEC23A-207ENST00000554615 LIPNQ5VXI9 398 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 BICRALQ6AI39 1079 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 MZT2BQ6NZ67 158 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 UTS2BQ765I0 119 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 ZAR1Q86SH2 424 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 AMIGO1Q86WK6 493 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 WDFY1Q8IWB7 410 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 ATP6V1C2Q8NEY4 427 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 OR5D16Q8NGK9 328 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 OR9A2Q8NGT5 310 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 PFN4Q8NHR9 129 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 TEX47Q8TBZ9 253 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 FANK1Q8TC84 345 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 CYB5D2Q8WUJ1 264 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 MALSU1Q96EH3 234 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 C4orf45Q96LM5 186 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 TSPAN32Q96QS1 320 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 SEC22CQ9BRL7 303 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 SLC17A9Q9BYT1 436 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 POTEKPQ9BYX7 375 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 QRSL1Q9H0R6 528 aaKnown RBP3.11□□□□□ -1.91
SEC23A-207ENST00000554615 RANGRFQ9HD47 186 aaPredicted RBP3.11□□□□□ -1.91
SEC23A-207ENST00000554615 CYTL1Q9NRR1 136 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 MRPL22Q9NWU5 206 aaKnown RBP3.11□□□□□ -1.91
SEC23A-207ENST00000554615 DNAJC27Q9NZQ0 273 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 CTSFQ9UBX1 484 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 SLC23A1Q9UHI7 598 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 SLC7A7Q9UM01 511 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF281Q9Y2X9 895 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 MRPS23Q9Y3D9 190 aaKnown RBP3.11□□□□□ -1.91
SEC23A-207ENST00000554615 MMP24Q9Y5R2 645 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 WNT6Q9Y6F9 365 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 U3KQV3 271 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 GOLGB1Q14789 3259 aaKnown RBP3.11□□□□□ -1.91
SEC23A-207ENST00000554615 SPTBN5Q9NRC6 3674 aaKnown RBP3.11□□□□□ -1.91
SEC23A-207ENST00000554615 TEX13CA0A0J9YWL9 993 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 TMEM212A6NML5 194 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 TFECO14948 347 aaPredicted RBP3.11□□□□□ -1.91
SEC23A-207ENST00000554615 CCL16O15467 120 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 NOS1APO75052 506 aaPredicted RBP3.11□□□□□ -1.91
SEC23A-207ENST00000554615 WNT1P04628 370 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 ACAA1P09110 424 aaPredicted RBP3.11□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF888P0CJ79 500 aaPredicted RBP3.11□□□□□ -1.91
SEC23A-207ENST00000554615 VSIG10L2P0DP72 767 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 PRG2P13727 222 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF17P17021 662 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 ALOX12P18054 663 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 ENPP1P22413 925 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 ZBTB25P24278 435 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 FKBP2P26885 142 aaKnown RBP3.11□□□□□ -1.91
SEC23A-207ENST00000554615 SLC6A6P31641 620 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 SOX11P35716 441 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 NCBP2P52298 156 aaKnown RBP eCLIP3.11□□□□□ -1.91
SEC23A-207ENST00000554615 MANFP55145 182 aaKnown RBP3.11□□□□□ -1.91
SEC23A-207ENST00000554615 CDH11P55287 796 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 CXADRP78310 365 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 TGM3Q08188 693 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 SHBQ15464 509 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 SGCBQ16585 318 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 SLC25A35Q3KQZ1 300 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF260Q3ZCT1 412 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 PDLIM3Q53GG5 364 aaPredicted RBP3.11□□□□□ -1.91
SEC23A-207ENST00000554615 OR2G6Q5TZ20 316 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF880Q6PDB4 577 aa3.11□□□□□ -1.91
SEC23A-207ENST00000554615 LRRN1Q6UXK5 716 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms