RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 NDUFS1P28331 727 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ART1P52961 327 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 SIRPAP78324 504 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 BTN3A2P78410 334 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 IL10RAQ13651 578 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ATXN7L3Q14CW9 347 aaPredicted RBP4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ODF4Q2M2E3 257 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ZNF528Q3MIS6 628 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 LRRC37A5PQ49AS3 106 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 TMEM31Q5JXX7 168 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 TMEM69Q5SWH9 247 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 FAM69AQ5T7M9 428 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 NUDT18Q6ZVK8 323 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 PARGQ86W56 976 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 GID4Q8IVV7 300 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 GLB1L2Q8IW92 636 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 EIF4E3Q8N5X7 224 aaKnown RBP4.45□□□□□ -1.7
LIMA1-214ENST00000552783 MRPL43Q8N983 215 aaKnown RBP4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ACOT4Q8N9L9 421 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 PXT1Q8NFP0 134 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 OR8S1Q8NH09 359 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 C1orf216Q8TAB5 229 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 GRHL3Q8TE85 626 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 DUSP19Q8WTR2 217 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 FCAMRQ8WWV6 532 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 PLEKHA1Q9HB21 404 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 NRIP3Q9NQ35 241 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 SLC22A11Q9NSA0 550 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 TAS2R10Q9NYW0 307 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 TAS2R3Q9NYW6 316 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 KLHL9Q9P2J3 617 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 FBXL3Q9UKT7 428 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 CES1P1Q9UKY3 287 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ZNF337Q9Y3M9 751 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 EDDM13A0A1B0GTR0 161 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 OR6C68A6NDL8 312 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 GRXCR1A8MXD5 290 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 SULT1C2O00338 296 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 SYT5O00445 386 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 CCSO14618 274 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 OGG1O15527 345 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 PRICKLE3O43900 615 aaPredicted RBP4.45□□□□□ -1.7
LIMA1-214ENST00000552783 PRAF2O60831 178 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 SLC25A12O75746 678 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 RASGRP1O95267 797 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 WDPCPO95876 746 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 HIST1H1CP16403 213 aaKnown RBP4.45□□□□□ -1.7
LIMA1-214ENST00000552783 EDNRAP25101 427 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 MAOBP27338 520 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ITPKBP27987 946 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ACTR1BP42025 376 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 RPS27P42677 84 aaKnown RBP4.45□□□□□ -1.7
LIMA1-214ENST00000552783 SOX2P48431 317 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 LUMP51884 338 aaPredicted RBP4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ACTR1AP61163 376 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 UBE2IP63279 158 aaKnown RBP4.45□□□□□ -1.7
LIMA1-214ENST00000552783 REEP5Q00765 189 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 FLI1Q01543 452 aaPredicted RBP4.45□□□□□ -1.7
LIMA1-214ENST00000552783 TNFRSF17Q02223 184 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 FGL1Q08830 312 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 MLC1Q15049 377 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 DUSP5Q16690 384 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 DEFB134Q4QY38 66 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 PRRT3Q5FWE3 981 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ELFN2Q5R3F8 820 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 MANEAQ5SRI9 462 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 RBMS3Q6XE24 437 aaKnown RBP4.45□□□□□ -1.7
LIMA1-214ENST00000552783 UBE2Q1Q7Z7E8 422 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ASPGQ86U10 573 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 FAM219AQ8IW50 185 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 TMEFF1Q8IYR6 380 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 C10orf53Q8N6V4 93 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 LINC00469Q8N7U9 141 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 TEX19Q8NA77 164 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 OR2AK2Q8NG84 335 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 OR52E2Q8NGJ4 325 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 OR51A4Q8NGJ6 313 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 OR51S1Q8NGJ8 323 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 OR1S2Q8NGQ3 325 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 TMEM239Q8WW34 195 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 NSMAFQ92636 917 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 BADQ92934 168 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 BPIFA2Q96DR5 249 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 FBXO17Q96EF6 278 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 DNAJA3Q96EY1 480 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ZNF681Q96N22 645 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 PTCHD1Q96NR3 888 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 CAMK1GQ96NX5 476 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 CD180Q99467 661 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 GAL3ST1Q99999 423 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 C7orf50Q9BRJ6 194 aaKnown RBP4.45□□□□□ -1.7
LIMA1-214ENST00000552783 SLC6A15Q9H2J7 730 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 TMEM231Q9H6L2 316 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 PRDM7Q9NQW5 492 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 ACTR10Q9NZ32 417 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 GLS2Q9UI32 602 aa4.45□□□□□ -1.7
LIMA1-214ENST00000552783 THSD7BQ9C0I4 1608 aa4.44□□□□□ -1.7
LIMA1-214ENST00000552783 TRAV8-7A0A075B6U6 113 aa4.44□□□□□ -1.7
LIMA1-214ENST00000552783 A0A1B0GVT2 93 aa4.44□□□□□ -1.7
LIMA1-214ENST00000552783 HMSDA8MTL9 139 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms