RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 ZNF208O43345 1280 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 TPST2O60704 377 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 WBP4O75554 376 aaKnown RBP3.23□□□□□ -1.89
LIMA1-208ENST00000551691 TRMUO75648 421 aaKnown RBP3.23□□□□□ -1.89
LIMA1-208ENST00000551691 SCRG1O75711 98 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 KLF7O75840 302 aaPredicted RBP3.23□□□□□ -1.89
LIMA1-208ENST00000551691 MBD3O95983 291 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 RHOCP08134 193 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 NGFRP08138 427 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 SLC35G4P0C7Q5 338 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 UQCRBP14927 111 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 PVRP15151 417 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 NCF2P19878 526 aaPredicted RBP3.23□□□□□ -1.89
LIMA1-208ENST00000551691 CCNCP24863 283 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 TRIM23P36406 574 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 SSR1P43307 286 aaKnown RBP3.23□□□□□ -1.89
LIMA1-208ENST00000551691 OR3A2P47893 321 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 FOXG1P55316 489 aaPredicted RBP3.23□□□□□ -1.89
LIMA1-208ENST00000551691 ATP5IP56385 69 aaPredicted RBP3.23□□□□□ -1.89
LIMA1-208ENST00000551691 BTG1P62324 171 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 PPIAP62937 165 aaKnown RBP3.23□□□□□ -1.89
LIMA1-208ENST00000551691 RBBP4Q09028 425 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 INCA1Q0VD86 236 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 MSLNQ13421 630 aaPredicted RBP3.23□□□□□ -1.89
LIMA1-208ENST00000551691 KLF5Q13887 457 aaPredicted RBP3.23□□□□□ -1.89
LIMA1-208ENST00000551691 P2RY14Q15391 338 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 SYCP1Q15431 976 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 RABGAP1LQ5R372 815 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 BEND6Q5SZJ8 279 aaPredicted RBP3.23□□□□□ -1.89
LIMA1-208ENST00000551691 SPATA46Q5T0L3 261 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 PNCKQ6P2M8 343 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 IGFL2Q6UWQ7 119 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 PAMR1Q6UXH9 720 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 RFLNAQ6ZTI6 216 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 Q6ZVQ6 151 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 C16orf62Q7Z3J2 963 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 NFE4Q86UQ8 179 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 NELFCDQ8IXH7 590 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 ZNF679Q8IYX0 411 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 RPRMLQ8N4K4 120 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 OR56B2PQ8NGI1 322 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 LILRB4Q8NHJ6 448 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 FBXO25Q8TCJ0 367 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 DYRK2Q92630 601 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 TADA1Q96BN2 335 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 AKR1E2Q96JD6 320 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 C4orf36Q96KX1 117 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 VSTM2LQ96N03 204 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 UHRF2Q96PU4 802 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 RAB40CQ96S21 281 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 SLC39A3Q9BRY0 314 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 C1QTNF4Q9BXJ3 329 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 SP140LQ9H930 580 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 RARRES3Q9UL19 164 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 RNF6Q9Y252 685 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 ZNF835Q9Y2P0 537 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 SLC6A5Q9Y345 797 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 L3MBTL1Q9Y468 752 aa3.23□□□□□ -1.89
LIMA1-208ENST00000551691 ARID1AO14497 2285 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 A0A0J9YVX5 310 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 A0A1W2PPR1 153 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 PRAC2D3DTV9 90 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 POP4O95707 220 aaKnown RBP3.22□□□□□ -1.89
LIMA1-208ENST00000551691 ASS1P00966 412 aaKnown RBP3.22□□□□□ -1.89
LIMA1-208ENST00000551691 HLA-DRAP01903 254 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 CRYAAP02489 173 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 KLK3P07288 261 aaPredicted RBP3.22□□□□□ -1.89
LIMA1-208ENST00000551691 DBTP11182 482 aaKnown RBP3.22□□□□□ -1.89
LIMA1-208ENST00000551691 NELFEP18615 380 aaKnown RBP3.22□□□□□ -1.89
LIMA1-208ENST00000551691 C4BPBP20851 252 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 PEX19P40855 299 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 FHITP49789 147 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 PDLIM4P50479 330 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 AIF1P55008 147 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 RPS4XP62701 263 aaKnown RBP3.22□□□□□ -1.89
LIMA1-208ENST00000551691 POU3F1Q03052 451 aaPredicted RBP3.22□□□□□ -1.89
LIMA1-208ENST00000551691 FGL1Q08830 312 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 KIF5AQ12840 1032 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 CUL2Q13617 745 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 WDR38Q5JTN6 314 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 C1orf220Q5T0J3 134 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 AGAP7PQ5VUJ5 663 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 ASPHD2Q6ICH7 369 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 STEAP1BQ6NZ63 245 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 RBMS3Q6XE24 437 aaKnown RBP3.22□□□□□ -1.89
LIMA1-208ENST00000551691 FOXL2NBQ6ZUU3 175 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 SLC26A9Q7LBE3 791 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 RANBP3LQ86VV4 465 aaPredicted RBP3.22□□□□□ -1.89
LIMA1-208ENST00000551691 HIPK1Q86Z02 1210 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 CCDC36Q8IYA8 594 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 BHLHE23Q8NDY6 225 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 STEAP2Q8NFT2 490 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 OR1L3Q8NH93 324 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 C8orf46Q8TAG6 207 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 GIMAP5Q96F15 307 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 SENP5Q96HI0 755 aaPredicted RBP3.22□□□□□ -1.89
LIMA1-208ENST00000551691 BTN2A3PQ96KV6 586 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 AGAP4Q96P64 663 aa3.22□□□□□ -1.89
LIMA1-208ENST00000551691 DCTN5Q9BTE1 182 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms