RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 GATA5Q9BWX5 397 aaPredicted RBP10.95□□□□□ -0.66
SCAF11-208ENST00000546534 TMPRSS13Q9BYE2 586 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 NOX3Q9HBY0 568 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 CRLF2Q9HC73 371 aa10.95□□□□□ -0.66
SCAF11-208ENST00000546534 PSMC3IPQ9P2W1 217 aaPredicted RBP10.95□□□□□ -0.66
SCAF11-208ENST00000546534 PRAMEF27A3QJZ7 478 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 PPIHO43447 177 aaKnown RBP10.94□□□□□ -0.66
SCAF11-208ENST00000546534 SCN2BO60939 215 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 FGF4P08620 206 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 HKR1P10072 659 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 ARAFP10398 606 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 ADRA2CP18825 462 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 PRPS1L1P21108 318 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 NR4A1P22736 598 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 ARR3P36575 388 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 ALDH3B1P43353 468 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 EVX1P49640 407 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 SEC24CP53992 1094 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 SH3BGRP55822 239 aaPredicted RBP10.94□□□□□ -0.66
SCAF11-208ENST00000546534 MYBPC1Q00872 1141 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 XKR7Q5GH72 579 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 TNFAIP8L2Q6P589 184 aaPredicted RBP10.94□□□□□ -0.66
SCAF11-208ENST00000546534 SYT10Q6XYQ8 523 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 EPHX4Q8IUS5 362 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 BPIFB2Q8N4F0 458 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 LRRC17Q8N6Y2 441 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 CCDC63Q8NA47 563 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 ROPN1LQ96C74 230 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 LINC00470Q9BZP3 86 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 MS4A5Q9H3V2 200 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 ADPRHL2Q9NX46 363 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 PPIAL4AQ9Y536 164 aa10.94□□□□□ -0.66
SCAF11-208ENST00000546534 FAAHO00519 579 aa10.93□□□□□ -0.66
SCAF11-208ENST00000546534 RP2O75695 350 aa10.93□□□□□ -0.66
SCAF11-208ENST00000546534 VAMP5O95183 116 aa10.93□□□□□ -0.66
SCAF11-208ENST00000546534 AGR2O95994 175 aa10.93□□□□□ -0.66
SCAF11-208ENST00000546534 CHRNGP07510 517 aa10.93□□□□□ -0.66
SCAF11-208ENST00000546534 CKAP4Q07065 602 aaKnown RBP10.93□□□□□ -0.66
SCAF11-208ENST00000546534 BNIP2Q12982 314 aa10.93□□□□□ -0.66
SCAF11-208ENST00000546534 MAD2L1BPQ15013 274 aaPredicted RBP10.93□□□□□ -0.66
SCAF11-208ENST00000546534 PGS1Q32NB8 556 aa10.93□□□□□ -0.66
SCAF11-208ENST00000546534 ZNF311Q5JNZ3 666 aa10.93□□□□□ -0.66
SCAF11-208ENST00000546534 C6orf136Q5SQH8 315 aa10.93□□□□□ -0.66
SCAF11-208ENST00000546534 OR4F3Q6IEY1 312 aa10.93□□□□□ -0.66
SCAF11-208ENST00000546534 ACSM5Q6NUN0 579 aa10.93□□□□□ -0.66
SCAF11-208ENST00000546534 MDP1Q86V88 176 aa10.93□□□□□ -0.66
SCAF11-208ENST00000546534 C10orf107Q8IVU9 208 aa10.93□□□□□ -0.66
SCAF11-208ENST00000546534 IL17RDQ8NFM7 739 aa10.93□□□□□ -0.66
SCAF11-208ENST00000546534 C22orf15Q8WYQ4 148 aa10.93□□□□□ -0.66
SCAF11-208ENST00000546534 ZNF837Q96EG3 531 aaPredicted RBP10.93□□□□□ -0.66
SCAF11-208ENST00000546534 C3orf30Q96M34 536 aa10.93□□□□□ -0.66
SCAF11-208ENST00000546534 SYT3Q9BQG1 590 aa10.93□□□□□ -0.66
SCAF11-208ENST00000546534 TAPBPLQ9BX59 468 aa10.93□□□□□ -0.66
SCAF11-208ENST00000546534 SLC52A3Q9NQ40 469 aa10.93□□□□□ -0.66
SCAF11-208ENST00000546534 DDX28Q9NUL7 540 aaKnown RBP10.93□□□□□ -0.66
SCAF11-208ENST00000546534 TRRAPQ9Y4A5 3859 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 CFAP73A6NFT4 308 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 RPL36A-HNRNPH2H7BZ11 118 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 RIPK2O43353 540 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 PLPP2O43688 288 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 NCR1O76036 304 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 MPZL1O95297 269 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 GSNP06396 782 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 ANPEPP15144 967 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 CXCR1P25024 350 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 CRHR1P34998 444 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 CCT5P48643 541 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 EPS8Q12929 822 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 GPAT3Q53EU6 434 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 LCE2AQ5TA79 106 aaPredicted RBP10.92□□□□□ -0.66
SCAF11-208ENST00000546534 PRAMEF8Q5VWM4 474 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 PRAMEF7Q5VXH5 474 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 REP15Q6BDI9 236 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 ZCCHC23Q6ZST2 131 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 TRMT10CQ7L0Y3 403 aaKnown RBP10.92□□□□□ -0.66
SCAF11-208ENST00000546534 LRP11Q86VZ4 500 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 CMIPQ8IY22 773 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 FNDC5Q8NAU1 212 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 OR4A15Q8NGL6 344 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 NANPQ8TBE9 248 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 AGR3Q8TD06 166 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 ZNF416Q9BWM5 594 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 ZNF665Q9H7R5 613 aa10.92□□□□□ -0.66
SCAF11-208ENST00000546534 MYEF2Q9P2K5 600 aaKnown RBP10.92□□□□□ -0.66
SCAF11-208ENST00000546534 A0A0G2JMP0 313 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 A0A0X1KG70 313 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 AGAP5A6NIR3 686 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 FRS3O43559 492 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 SEC14L2O76054 403 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 ZNF432O94892 652 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 CHRM4P08173 479 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 G6PDP11413 515 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 CAPZA2P47755 286 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 CLDN17P56750 224 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 MRPS11P82912 194 aaKnown RBP10.91□□□□□ -0.66
SCAF11-208ENST00000546534 PCLAFQ15004 111 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 GSTA3Q16772 222 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 CEACAM16Q2WEN9 425 aa10.91□□□□□ -0.66
SCAF11-208ENST00000546534 ARSJQ5FYB0 599 aaPredicted RBP10.91□□□□□ -0.66
SCAF11-208ENST00000546534 CCDC36Q8IYA8 594 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms