RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 TUBG2Q9NRH3 451 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 C20orf96Q9NUD7 363 aaPredicted RBP3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 AHSPQ9NZD4 102 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 PTTG3PQ9NZH4 202 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 C15orf41Q9Y2V0 281 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 NOSIPQ9Y314 301 aaKnown RBP3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 MRPL11Q9Y3B7 192 aaKnown RBP3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 FBXO7Q9Y3I1 522 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 TIMM22Q9Y584 194 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 HTTP42858 3142 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 MON2Q7Z3U7 1717 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 UNC80Q8N2C7 3258 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF831Q5JPB2 1677 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 TTC3P53804 2025 aa3.26□□□□□ -1.89
SFSWAP-211ENST00000542813 MED23Q9ULK4 1368 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 CASP8AP2Q9UKL3 1982 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 SALL1Q9NSC2 1324 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 A0A0D9SFI3 127 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 BCLAF3A2AJT9 711 aaKnown RBP3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 CCDC182A6NF36 153 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 GABRR3A8MPY1 467 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 BLOC1S5-TXNDC5H3BN57 136 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 TEX46H3BTG2 121 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF701M0R085 212 aaPredicted RBP3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 DLGAP1O14490 977 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 TRAFD1O14545 582 aaPredicted RBP3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 PCDH7O60245 1069 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 STX10O60499 249 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 OR2J3O76001 311 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 TMEM50AO95807 157 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 HPP00738 406 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 NPPAP01160 153 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 IGHG4P01861 327 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 P04436 131 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 ALPLP05186 524 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 CCNB1P14635 433 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 POLR2EP19388 210 aaKnown RBP3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 MSR1P21757 451 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 PRKACGP22612 351 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 CDH5P33151 784 aaPredicted RBP3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 BCAP31P51572 246 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 MFAP2P55001 183 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 RND3P61587 244 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 SNRPD1P62314 119 aaKnown RBP3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 CYCSP99999 105 aaKnown RBP3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 ARL16Q0P5N6 197 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 ST3GAL3Q11203 375 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 ILKQ13418 452 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 XRCC4Q13426 336 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 CUL1Q13616 776 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 VGLL4Q14135 290 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 SPCS2Q15005 226 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 MS4A18Q3C1V0 323 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 LINC00242Q5T6M2 205 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 FAM219BQ5XKK7 198 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 FAM53AQ6NSI3 398 aaPredicted RBP3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 CCDC121Q6ZUS5 278 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 ERICH1Q86X53 443 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 GABRG1Q8N1C3 465 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 ARHGAP18Q8N392 663 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 RNF10Q8N5U6 811 aaKnown RBP3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 RFLNBQ8N5W9 214 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 SUMF1Q8NBK3 374 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 OR4K14Q8NGD5 310 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 OR9A1PQ8NGU1 263 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 RFESDQ8TAC1 157 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 DYDC1Q8WWB3 177 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 IFT81Q8WYA0 676 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 NABP1Q96AH0 204 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 CXorf40BQ96DE9 158 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 WBP1Q96G27 269 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 PLEKHA8Q96JA3 519 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 PANX2Q96RD6 677 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 MBOAT4Q96T53 435 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 MAPKAP1Q9BPZ7 522 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 SLC35A5Q9BS91 424 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 TEKT3Q9BXF9 490 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 RAB34Q9BZG1 259 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 NAT10Q9H0A0 1025 aaKnown RBP3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 WDR13Q9H1Z4 485 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 PPA2Q9H2U2 334 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 MOB1AQ9H8S9 216 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 VCX3AQ9NNX9 186 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 MRPS30Q9NP92 439 aaKnown RBP3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 AGPAT3Q9NRZ7 376 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 FKBP14Q9NWM8 211 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 ELOVL2Q9NXB9 296 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 MGAT4AQ9UM21 535 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 PDE10AQ9Y233 779 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 NTNG1Q9Y2I2 539 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 EVPLQ92817 2033 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 BCORQ6W2J9 1755 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 FLT4P35916 1363 aa3.25□□□□□ -1.89
SFSWAP-211ENST00000542813 COL5A3P25940 1745 aaPredicted RBP3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 NRXN2Q9P2S2 1712 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 ECM29Q5VYK3 1845 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 A0A1B0GVG6 124 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 SAGE2PA6NJ88 616 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 PMS2P5A8MQ11 134 aa3.24□□□□□ -1.89
SFSWAP-211ENST00000542813 WWP2O00308 870 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms