RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 FAM199XQ6PEV8 388 aaPredicted RBP4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 TEX261Q6UWH6 196 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 NPSR1Q6W5P4 371 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 KRT74Q7RTS7 529 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 RD3Q7Z3Z2 195 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 FGD2Q7Z6J4 655 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 SYT9Q86SS6 491 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 THNSL2Q86YJ6 484 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 CMTM4Q8IZR5 234 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 EID2Q8N6I1 236 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 EXD3Q8N9H8 876 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNF527Q8NB42 609 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 SDR9C7Q8NEX9 313 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 OR11H4Q8NGC9 324 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 OR4N2Q8NGD1 307 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 OR4K13Q8NH42 304 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 OR56B4Q8NH76 319 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 OR10G6Q8NH81 332 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 GPBAR1Q8TDU6 330 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNF431Q8TF32 576 aaPredicted RBP4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 LIPHQ8WWY8 451 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 ARSGQ96EG1 525 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 SIPA1Q96FS4 1042 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 RADILQ96JH8 1075 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 LCORQ96JN0 433 aaPredicted RBP4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 SORCS2Q96PQ0 1159 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 CCNL2Q96S94 520 aaPredicted RBP4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 CACNG6Q9BXT2 260 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 GSDMCQ9BYG8 508 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 SLC19A3Q9BZV2 496 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 LMAN2LQ9H0V9 348 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 NANSQ9NR45 359 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 KLHL1Q9NR64 748 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 C2orf42Q9NWW7 574 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 UCKL1Q9NWZ5 548 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 STMN3Q9NZ72 180 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 CPNE7Q9UBL6 633 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 ATXN7L1Q9ULK2 861 aaPredicted RBP4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 MGAT4AQ9UM21 535 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 COPS3Q9UNS2 423 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 CLDN16Q9Y5I7 305 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 IER3IP1Q9Y5U9 82 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 U3KQ87 197 aa4.75□□□□□ -1.65
ATPAF1-212ENST00000542495 NUP210LQ5VU65 1888 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 IGKV1D-42A0A075B6H8 117 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 TRBV2A0A0J9YWF9 115 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 A0A1W2PPK0 400 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 BLACEA4D250 179 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 OR6C68A6NDL8 312 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 IFITM5A6NNB3 132 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 LEUTXA8MZ59 168 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 PRR32B1ATL7 298 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNF879B4DU55 563 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 G3V3Q6 166 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 AIPO00170 330 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNF593O00488 134 aaPredicted RBP4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 PDCD5O14737 125 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 SHOXO15266 292 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 MAGEB4O15481 346 aaPredicted RBP4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 SULT1B1O43704 296 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 CTNSO60931 367 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 RDH16O75452 317 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 ITGA10O75578 1167 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 SLC22A5O76082 557 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 OR7A10O76100 309 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 TPPPO94811 219 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 GLCEO94923 617 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 HTR3BO95264 441 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 KLF8O95600 359 aaPredicted RBP4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 TGM6O95932 706 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 EGFP01133 1207 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 CT45A8P0DMV1 189 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 CT45A9P0DMV2 189 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 APEHP13798 732 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 SRMP19623 302 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 NAA10P41227 235 aaPredicted RBP4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 GPR3P46089 330 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 CCR6P51684 374 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 CCR9P51686 369 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 SLC25A1P53007 311 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 ZP1P60852 638 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 RIPPLY1Q0D2K3 151 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 SNTB2Q13425 540 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNHIT3Q15649 155 aaPredicted RBP4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 COL28A1Q2UY09 1125 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 PRTGQ2VWP7 1150 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 CT45A2Q5DJT8 189 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 FAM69AQ5T7M9 428 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 FNDC7Q5VTL7 733 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 ZC3H14Q6PJT7 736 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 DNM1P46Q6ZS02 220 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 ESPNLQ6ZVH7 1005 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 LRRC75AQ8NAA5 344 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 ZSCAN1Q8NBB4 408 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 RCBTB1Q8NDN9 531 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 FAM71CQ8NEG0 241 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNF680Q8NEM1 530 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 LGALS14Q8TCE9 139 aa4.74□□□□□ -1.65
ATPAF1-212ENST00000542495 SNX33Q8WV41 574 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms