RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 MRPS2Q9Y399 296 aaKnown RBP13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 COLEC10Q9Y6Z7 277 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 IGHV5-51A0A0C4DH38 117 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 C4orf47A7E2U8 309 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 RHPN2P1A8MT19 583 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 ARPC5O15511 151 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 NT5EP21589 574 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 DUSP5Q16690 384 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 HYAL4Q2M3T9 481 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 SLC25A35Q3KQZ1 300 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 ZNF620Q6ZNG0 422 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 SERPINA12Q8IW75 414 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 OR8K3Q8NH51 312 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 FLVCR1-AS1Q8TAF5 88 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 PRDM9Q9NQV7 894 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 ACTR10Q9NZ32 417 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 GPR160Q9UJ42 338 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 PCOLCE2Q9UKZ9 415 aa13.14□□□□□ -0.31
SFSWAP-210ENST00000541286 DSPP15924 2871 aaKnown RBP13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 ZNF98A6NK75 572 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 RNF13O43567 381 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 GPR85P60893 370 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 B2MP61769 119 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 ERVK-25P63136 954 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 NHLRC1Q6VVB1 395 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 OR4D9Q8NGE8 314 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 CD180Q99467 661 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 ACTRT3Q9BYD9 372 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 DPAGT1Q9H3H5 408 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 ZNF304Q9HCX3 659 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 ZNF443Q9Y2A4 671 aaPredicted RBP13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 IGF2RP11717 2491 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 ANXA2P2A6NMY6 339 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 KDM4EB2RXH2 506 aaPredicted RBP13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 PRR23D1E9PI22 279 aaPredicted RBP13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 PRR23D2P0DMB1 279 aaPredicted RBP13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 CXCL2P19875 107 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 AHCYP23526 432 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 OR12D2P58182 307 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 EXOSC7Q15024 291 aaKnown RBP13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 MAPK14Q16539 360 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 CD300LDQ6UXZ3 194 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 C3P1Q6ZMU1 363 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 OR2T4Q8NH00 348 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 C2CD4CQ8TF44 421 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 ADAT1Q9BUB4 502 aaKnown RBP13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 H0YC42 278 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 TFP02787 698 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 H2AFB2P0C5Z0 115 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 MAKP20794 623 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 CMPK1P30085 196 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 NAA10P41227 235 aaPredicted RBP13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 CBX5P45973 191 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 ETFDHQ16134 617 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 C14orf28Q4W4Y0 310 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 TMEM35AQ53FP2 167 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 FAM69BQ5VUD6 431 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 SLC25A25Q6KCM7 469 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 ZNF836Q6ZNA1 936 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 OR5W2Q8NH69 310 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 C4orf36Q96KX1 117 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 UQCC2Q9BRT2 126 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 IER2Q9BTL4 223 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 AUNIPQ9H7T9 357 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 CA10Q9NS85 328 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 BABAM2Q9NXR7 383 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 COPZ2Q9P299 210 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 ADAM29Q9UKF5 820 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 LIPT1Q9Y234 373 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 AUP1Q9Y679 476 aa13.13□□□□□ -0.31
SFSWAP-210ENST00000541286 A0A1W2PQM1 296 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 L7N2F9 121 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 P2RX6O15547 441 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 SPDEFO95238 335 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 STAT5AP42229 794 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 VEGFCP49767 419 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 EFNB1P98172 346 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 NNATQ16517 81 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 TP53I3Q53FA7 332 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 FAM74A1Q5RGS3 127 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 ZFP82Q8N141 532 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 C17orf47Q8NEP4 570 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 MARVELD3Q96A59 401 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 DNAJA3Q96EY1 480 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 ERMAPQ96PL5 475 aaPredicted RBP13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 NPAS1Q99742 590 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 SOSTQ9BQB4 213 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 REG4Q9BYZ8 158 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 SHARPINQ9H0F6 387 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 PCED1AQ9H1Q7 454 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 UNC119BA6NIH7 251 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 BET1O15155 118 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 RGS9O75916 674 aaPredicted RBP13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 SNRPBP14678 240 aaKnown RBP13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 HTR1FP30939 366 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 FGF9P31371 208 aaPredicted RBP13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 GXYLT1Q4G148 440 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 THSD4Q6ZMP0 1018 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 FRRS1Q6ZNA5 592 aa13.12□□□□□ -0.31
SFSWAP-210ENST00000541286 COX18Q8N8Q8 333 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms