RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 LRRC34Q8IZ02 419 aa23.16■■□□□ 1.3
CHFR-218ENST00000540963 ZCCHC24Q8N2G6 241 aaKnown RBP23.16■■□□□ 1.3
CHFR-218ENST00000540963 SGMS2Q8NHU3 365 aa23.16■■□□□ 1.3
CHFR-218ENST00000540963 SORT1Q99523 831 aa23.16■■□□□ 1.3
CHFR-218ENST00000540963 RAB21Q9UL25 225 aa23.16■■□□□ 1.3
CHFR-218ENST00000540963 IGHV2OR16-5A0A0B4J2B6 119 aa23.15■■□□□ 1.3
CHFR-218ENST00000540963 CDHR4A6H8M9 788 aa23.15■■□□□ 1.3
CHFR-218ENST00000540963 NPIPB7O75200 414 aa23.15■■□□□ 1.3
CHFR-218ENST00000540963 COPZ1P61923 177 aa23.15■■□□□ 1.3
CHFR-218ENST00000540963 C1orf140Q5VVS0 124 aa23.15■■□□□ 1.3
CHFR-218ENST00000540963 METTL17Q9H7H0 456 aaPredicted RBP23.15■■□□□ 1.3
CHFR-218ENST00000540963 TMEM229AB2RXF0 380 aa23.14■■□□□ 1.29
CHFR-218ENST00000540963 ACAA2P42765 397 aaKnown RBP23.14■■□□□ 1.29
CHFR-218ENST00000540963 CHI3L2Q15782 390 aa23.14■■□□□ 1.29
CHFR-218ENST00000540963 SPANXN4Q5MJ08 99 aa23.14■■□□□ 1.29
CHFR-218ENST00000540963 STK35Q8TDR2 534 aa23.14■■□□□ 1.29
CHFR-218ENST00000540963 E9PBE3 544 aa23.13■■□□□ 1.29
CHFR-218ENST00000540963 ZNF432O94892 652 aa23.13■■□□□ 1.29
CHFR-218ENST00000540963 SERPINE1P05121 402 aa23.13■■□□□ 1.29
CHFR-218ENST00000540963 CELA3BP08861 270 aa23.13■■□□□ 1.29
CHFR-218ENST00000540963 NR2F1P10589 423 aa23.13■■□□□ 1.29
CHFR-218ENST00000540963 S100A3P33764 101 aa23.13■■□□□ 1.29
CHFR-218ENST00000540963 ABCE1P61221 599 aaKnown RBP23.13■■□□□ 1.29
CHFR-218ENST00000540963 LRRC74AQ0VAA2 488 aa23.13■■□□□ 1.29
CHFR-218ENST00000540963 DAG1Q14118 895 aa23.13■■□□□ 1.29
CHFR-218ENST00000540963 FAM174BQ3ZCQ3 159 aa23.13■■□□□ 1.29
CHFR-218ENST00000540963 SLC9B1Q4ZJI4 515 aa23.13■■□□□ 1.29
CHFR-218ENST00000540963 MYPOPQ86VE0 399 aaPredicted RBP23.13■■□□□ 1.29
CHFR-218ENST00000540963 CDK20Q8IZL9 346 aa23.13■■□□□ 1.29
CHFR-218ENST00000540963 MFSD8Q8NHS3 518 aa23.13■■□□□ 1.29
CHFR-218ENST00000540963 ZNF418Q8TF45 676 aaPredicted RBP23.13■■□□□ 1.29
CHFR-218ENST00000540963 PPP1R36Q96LQ0 422 aa23.13■■□□□ 1.29
CHFR-218ENST00000540963 MS4A5Q9H3V2 200 aa23.13■■□□□ 1.29
CHFR-218ENST00000540963 SSU72Q9NP77 194 aaKnown RBP23.13■■□□□ 1.29
CHFR-218ENST00000540963 RLIMQ9NVW2 624 aa23.13■■□□□ 1.29
CHFR-218ENST00000540963 GRIP1Q9Y3R0 1128 aa23.13■■□□□ 1.29
CHFR-218ENST00000540963 CMAHPQ9Y471 501 aa23.13■■□□□ 1.29
CHFR-218ENST00000540963 SPEF1Q9Y4P9 236 aa23.13■■□□□ 1.29
CHFR-218ENST00000540963 SH3PXD2BA1X283 911 aa23.12■■□□□ 1.29
CHFR-218ENST00000540963 BIRC5O15392 142 aa23.12■■□□□ 1.29
CHFR-218ENST00000540963 RGS16O15492 202 aaPredicted RBP23.12■■□□□ 1.29
CHFR-218ENST00000540963 SYNGR3O43761 229 aa23.12■■□□□ 1.29
CHFR-218ENST00000540963 ADRA2AP08913 450 aa23.12■■□□□ 1.29
CHFR-218ENST00000540963 ARF1P84077 181 aaKnown RBP23.12■■□□□ 1.29
CHFR-218ENST00000540963 IL1RL1Q01638 556 aa23.12■■□□□ 1.29
CHFR-218ENST00000540963 BNIP2Q12982 314 aa23.12■■□□□ 1.29
CHFR-218ENST00000540963 CCNIQ14094 377 aa23.12■■□□□ 1.29
CHFR-218ENST00000540963 PDCD2Q16342 344 aaPredicted RBP23.12■■□□□ 1.29
CHFR-218ENST00000540963 LIN52Q52LA3 116 aa23.12■■□□□ 1.29
CHFR-218ENST00000540963 REP15Q6BDI9 236 aa23.12■■□□□ 1.29
CHFR-218ENST00000540963 USP43Q70EL4 1123 aa23.12■■□□□ 1.29
CHFR-218ENST00000540963 CADM2Q8N3J6 435 aa23.12■■□□□ 1.29
CHFR-218ENST00000540963 TEX29Q8N6K0 151 aa23.12■■□□□ 1.29
CHFR-218ENST00000540963 FAM216AQ8WUB2 273 aa23.12■■□□□ 1.29
CHFR-218ENST00000540963 TMEM186Q96B77 213 aa23.12■■□□□ 1.29
CHFR-218ENST00000540963 HAO1Q9UJM8 370 aa23.12■■□□□ 1.29
CHFR-218ENST00000540963 USP22Q9UPT9 525 aa23.12■■□□□ 1.29
CHFR-218ENST00000540963 DSPPQ9NZW4 1301 aa23.11■■□□□ 1.29
CHFR-218ENST00000540963 TMEM89A2RUT3 159 aa23.11■■□□□ 1.29
CHFR-218ENST00000540963 CCDC154A6NI56 674 aa23.11■■□□□ 1.29
CHFR-218ENST00000540963 C1QCP02747 245 aa23.11■■□□□ 1.29
CHFR-218ENST00000540963 TFP02787 698 aa23.11■■□□□ 1.29
CHFR-218ENST00000540963 MYZAPP0CAP1 466 aa23.11■■□□□ 1.29
CHFR-218ENST00000540963 ZNF43P17038 809 aa23.11■■□□□ 1.29
CHFR-218ENST00000540963 SNTB2Q13425 540 aaKnown RBP23.11■■□□□ 1.29
CHFR-218ENST00000540963 KIRREL3Q8IZU9 778 aa23.11■■□□□ 1.29
CHFR-218ENST00000540963 PANX1Q96RD7 426 aa23.11■■□□□ 1.29
CHFR-218ENST00000540963 RACGAP1Q9H0H5 632 aa23.11■■□□□ 1.29
CHFR-218ENST00000540963 NOX3Q9HBY0 568 aa23.11■■□□□ 1.29
CHFR-218ENST00000540963 CALML5Q9NZT1 146 aa23.11■■□□□ 1.29
CHFR-218ENST00000540963 FTCDNL1E5RQL4 147 aa23.1■■□□□ 1.29
CHFR-218ENST00000540963 FZD7O75084 574 aa23.1■■□□□ 1.29
CHFR-218ENST00000540963 SLC43A1O75387 559 aa23.1■■□□□ 1.29
CHFR-218ENST00000540963 AHSA1O95433 338 aa23.1■■□□□ 1.29
CHFR-218ENST00000540963 MSMBP08118 114 aa23.1■■□□□ 1.29
CHFR-218ENST00000540963 GKN3PP0CG01 181 aa23.1■■□□□ 1.29
CHFR-218ENST00000540963 EGR1P18146 543 aa23.1■■□□□ 1.29
CHFR-218ENST00000540963 BGNP21810 368 aa23.1■■□□□ 1.29
CHFR-218ENST00000540963 NR4A1P22736 598 aa23.1■■□□□ 1.29
CHFR-218ENST00000540963 CLDN17P56750 224 aa23.1■■□□□ 1.29
CHFR-218ENST00000540963 ACTG1P63261 375 aa23.1■■□□□ 1.29
CHFR-218ENST00000540963 RNF220Q5VTB9 566 aa23.1■■□□□ 1.29
CHFR-218ENST00000540963 LSRQ86X29 649 aaPredicted RBP23.1■■□□□ 1.29
CHFR-218ENST00000540963 C3orf56Q8N813 242 aa23.1■■□□□ 1.29
CHFR-218ENST00000540963 OR52P1PQ8NH57 321 aa23.1■■□□□ 1.29
CHFR-218ENST00000540963 MRPL24Q96A35 216 aaKnown RBP23.1■■□□□ 1.29
CHFR-218ENST00000540963 CRLF2Q9HC73 371 aa23.1■■□□□ 1.29
CHFR-218ENST00000540963 GPR35Q9HC97 309 aa23.1■■□□□ 1.29
CHFR-218ENST00000540963 HIF1ANQ9NWT6 349 aa23.1■■□□□ 1.29
CHFR-218ENST00000540963 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.1■■□□□ 1.29
CHFR-218ENST00000540963 RAP2CQ9Y3L5 183 aa23.1■■□□□ 1.29
CHFR-218ENST00000540963 FAM157AC9JC47 383 aa23.09■■□□□ 1.29
CHFR-218ENST00000540963 M0R233 179 aa23.09■■□□□ 1.29
CHFR-218ENST00000540963 PNMTP11086 282 aa23.09■■□□□ 1.29
CHFR-218ENST00000540963 ACHEP22303 614 aa23.09■■□□□ 1.29
CHFR-218ENST00000540963 GPR6P46095 362 aaPredicted RBP23.09■■□□□ 1.29
CHFR-218ENST00000540963 NPRL3Q12980 569 aa23.09■■□□□ 1.29
CHFR-218ENST00000540963 ELFN2Q5R3F8 820 aa23.09■■□□□ 1.29
CHFR-218ENST00000540963 ZNF836Q6ZNA1 936 aa23.09■■□□□ 1.29
CHFR-218ENST00000540963 GPR137CQ8N3F9 429 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms