RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 NELFAQ9H3P2 528 aa12.3□□□□□ -0.44
SNHG1-213ENST00000540725 CA10Q9NS85 328 aa12.3□□□□□ -0.44
SNHG1-213ENST00000540725 CRNNQ9UBG3 495 aaPredicted RBP12.3□□□□□ -0.44
SNHG1-213ENST00000540725 LPAR3Q9UBY5 353 aa12.3□□□□□ -0.44
SNHG1-213ENST00000540725 A0A096LPE4 126 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 A0A1W2PPZ6 126 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 NDUFS8O00217 210 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 UBDO15205 165 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 LMX1BO60663 402 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 PDE5AO76074 875 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 NUDT7P0C024 238 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 CECR9P0C854 216 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 GTF2E2P29084 291 aaKnown RBP12.29□□□□□ -0.44
SNHG1-213ENST00000540725 NR4A2P43354 598 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 RPS5P46782 204 aaKnown RBP12.29□□□□□ -0.44
SNHG1-213ENST00000540725 SH3BGRP55822 239 aaPredicted RBP12.29□□□□□ -0.44
SNHG1-213ENST00000540725 CLDN17P56750 224 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 HOXC5Q00444 222 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 ROR2Q01974 943 aaKnown RBP12.29□□□□□ -0.44
SNHG1-213ENST00000540725 NAAAQ02083 359 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 EGR4Q05215 589 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 RGNQ15493 299 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 ADIPOQQ15848 244 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 CARTPTQ16568 116 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 C3orf36Q3SXR2 165 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 ANKRD16Q6P6B7 361 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 KDM8Q8N371 416 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 ANKS4BQ8N8V4 417 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 VRK1Q99986 396 aaPredicted RBP12.29□□□□□ -0.44
SNHG1-213ENST00000540725 PTDSS2Q9BVG9 487 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 RCE1Q9Y256 329 aa12.29□□□□□ -0.44
SNHG1-213ENST00000540725 B9A039 149 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 ZNF432O94892 652 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 IGLV1-44P01699 117 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 OR4A8P0C604 315 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 ZNF43P17038 809 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 IGFBP5P24593 272 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 CALCRP30988 508 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 VHLLQ6RSH7 139 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 MIER2Q8N344 545 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 ARIH2OSQ8N7S6 290 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 BBS10Q8TAM1 723 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 GTF2H4Q92759 462 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 MAL2Q969L2 176 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 SLC35B4Q969S0 331 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 KTI12Q96EK9 354 aaPredicted RBP12.28□□□□□ -0.44
SNHG1-213ENST00000540725 PRR14Q9BWN1 585 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 PAIP1Q9H074 479 aaKnown RBP12.28□□□□□ -0.44
SNHG1-213ENST00000540725 RAD21L1Q9H4I0 556 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 SEC61A2Q9H9S3 476 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 MOV10Q9HCE1 1003 aaKnown RBP12.28□□□□□ -0.44
SNHG1-213ENST00000540725 BCL2L10Q9HD36 194 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 MYOZ1Q9NP98 299 aaPredicted RBP12.28□□□□□ -0.44
SNHG1-213ENST00000540725 A4GALTQ9NPC4 353 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 RPS6KB2Q9UBS0 482 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 SEC14L4Q9UDX3 406 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 KCNS2Q9ULS6 477 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 PCDHB14Q9Y5E9 798 aa12.28□□□□□ -0.44
SNHG1-213ENST00000540725 LOC390937A0A1W2PQ73 354 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 RPL36A-HNRNPH2H7BZ11 118 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 CLIC1O00299 241 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 FZD7O75084 574 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 SLC43A1O75387 559 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 IGKV3-15P01624 115 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 BMP2P12643 396 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 APEHP13798 732 aaKnown RBP12.27□□□□□ -0.45
SNHG1-213ENST00000540725 HOXB1P14653 301 aaPredicted RBP12.27□□□□□ -0.45
SNHG1-213ENST00000540725 SLC18A1P54219 525 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 ARF1P84077 181 aaKnown RBP12.27□□□□□ -0.45
SNHG1-213ENST00000540725 FADDQ13158 208 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 EFNB3Q15768 340 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 FAM166AQ6J272 317 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 SLC2A7Q6PXP3 512 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 C6orf89Q6UWU4 347 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 FAM169BQ8N8A8 192 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 ANKK1Q8NFD2 765 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 OR4F15Q8NGB8 312 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 MSI2Q96DH6 328 aaKnown RBP12.27□□□□□ -0.45
SNHG1-213ENST00000540725 FOXN4Q96NZ1 517 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 OXGR1Q96P68 337 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 PLK3Q9H4B4 646 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 CHODLQ9H9P2 273 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 NKIRAS1Q9NYS0 192 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 B3GAT1Q9P2W7 334 aa12.27□□□□□ -0.45
SNHG1-213ENST00000540725 ANK2Q01484 3957 aa12.26□□□□□ -0.45
SNHG1-213ENST00000540725 IGHV4-61A0A0C4DH41 118 aa12.26□□□□□ -0.45
SNHG1-213ENST00000540725 LOC100289279A0A1B0GTE1 492 aa12.26□□□□□ -0.45
SNHG1-213ENST00000540725 SLC35F4A4IF30 521 aa12.26□□□□□ -0.45
SNHG1-213ENST00000540725 C5orf58C9J3I9 102 aa12.26□□□□□ -0.45
SNHG1-213ENST00000540725 M0R082 166 aa12.26□□□□□ -0.45
SNHG1-213ENST00000540725 AIM2O14862 343 aa12.26□□□□□ -0.45
SNHG1-213ENST00000540725 OR2T1O43869 369 aa12.26□□□□□ -0.45
SNHG1-213ENST00000540725 CELA3BP08861 270 aa12.26□□□□□ -0.45
SNHG1-213ENST00000540725 HOXB9P17482 250 aaPredicted RBP12.26□□□□□ -0.45
SNHG1-213ENST00000540725 PPOXP50336 477 aa12.26□□□□□ -0.45
SNHG1-213ENST00000540725 HGFACQ04756 655 aa12.26□□□□□ -0.45
SNHG1-213ENST00000540725 C1DQ13901 141 aaKnown RBP12.26□□□□□ -0.45
SNHG1-213ENST00000540725 FAM69AQ5T7M9 428 aa12.26□□□□□ -0.45
SNHG1-213ENST00000540725 C5orf46Q6UWT4 87 aa12.26□□□□□ -0.45
SNHG1-213ENST00000540725 IL17RELQ6ZVW7 336 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms