RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ACTA1P68133 377 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 LINC01590Q5TEZ4 76 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 TPRA1Q86W33 373 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 LSM14AQ8ND56 463 aaKnown RBP12.83□□□□□ -0.36
UBE3B-210ENST00000539599 OR2T27Q8NH04 317 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 OR52I2Q8NH67 350 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 PPP1R14AQ96A00 147 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 SLC25A38Q96DW6 304 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 SCMH1Q96GD3 660 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 GAL3ST4Q96RP7 486 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 DDOQ99489 341 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 MESP1Q9BRJ9 268 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 ALG12Q9BV10 488 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 OR8D2Q9GZM6 311 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 OR10A4Q9H209 315 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 OR51J1Q9H342 316 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 WDR76Q9H967 626 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 LIN7BQ9HAP6 207 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 SOHLH2Q9NX45 425 aa12.83□□□□□ -0.36
UBE3B-210ENST00000539599 IGHV5-51A0A0C4DH38 117 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 ZNF593O00488 134 aaPredicted RBP12.82□□□□□ -0.36
UBE3B-210ENST00000539599 CLPSP04118 112 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 UCHL1P09936 223 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 PTBP1P26599 531 aaKnown RBP eCLIP12.82□□□□□ -0.36
UBE3B-210ENST00000539599 EGR4Q05215 589 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 FAM199XQ6PEV8 388 aaPredicted RBP12.82□□□□□ -0.36
UBE3B-210ENST00000539599 MS4A15Q8N5U1 240 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 ZNF527Q8NB42 609 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 OR2T4Q8NH00 348 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 OR14A16Q8NHC5 309 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 AMELYQ99218 206 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 GAL3ST1Q99999 423 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 CHIAQ9BZP6 476 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 NXF5Q9H1B4 397 aaKnown RBP12.82□□□□□ -0.36
UBE3B-210ENST00000539599 NRIP3Q9NQ35 241 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 PCDHGA9Q9Y5G4 932 aaKnown RBP12.82□□□□□ -0.36
UBE3B-210ENST00000539599 C11orf98E9PRG8 122 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 FBXO45P0C2W1 286 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 UQCRC1P31930 480 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 LTBRP36941 435 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 SELENOPP49908 381 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 CTXN1P60606 82 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 Q6ZTK2 550 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 GRAMD2AQ8IUY3 354 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 HAVCR2Q8TDQ0 301 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 ASB12Q8WXK4 309 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 KCTD12Q96CX2 325 aaKnown RBP12.82□□□□□ -0.36
UBE3B-210ENST00000539599 ADOQ96SZ5 270 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 DHCR7Q9UBM7 475 aaKnown RBP12.82□□□□□ -0.36
UBE3B-210ENST00000539599 SCML1Q9UN30 329 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 MED12Q93074 2177 aa12.82□□□□□ -0.36
UBE3B-210ENST00000539599 ELOA3DA6NLF2 546 aaPredicted RBP12.81□□□□□ -0.36
UBE3B-210ENST00000539599 C17orf105B2RV13 164 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 ARHGEF9O43307 516 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 OR7A10O76100 309 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 UBL3O95164 117 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 MAS1P04201 325 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 ADRA2CP18825 462 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 STOMP27105 288 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 RABIFP47224 123 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 ZP1P60852 638 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 YPEL5P62699 121 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 ZNF141Q15928 474 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 PRTGQ2VWP7 1150 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 ELOA3BQ3SY89 546 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 TIGD3Q6B0B8 471 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 ELOA3Q8NG57 546 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 ZNF431Q8TF32 576 aaPredicted RBP12.81□□□□□ -0.36
UBE3B-210ENST00000539599 HOXB13Q92826 284 aaPredicted RBP12.81□□□□□ -0.36
UBE3B-210ENST00000539599 GTPBP2Q9BX10 602 aaKnown RBP12.81□□□□□ -0.36
UBE3B-210ENST00000539599 NIPAL2Q9H841 368 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 SLC6A5Q9Y345 797 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 MEIS3P1A6NDR6 274 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 CENPBD1B2RD01 187 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 CTNSO60931 367 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 RBM34P42696 430 aaKnown RBP12.81□□□□□ -0.36
UBE3B-210ENST00000539599 VEGFCP49767 419 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 SNTB2Q13425 540 aaKnown RBP12.81□□□□□ -0.36
UBE3B-210ENST00000539599 GSG1Q2KHT4 349 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 ZNF550Q7Z398 422 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 ZNF615Q8N8J6 731 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 SEC22CQ9BRL7 303 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 GON7Q9BXV9 100 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 MRM2Q9UI43 246 aaKnown RBP12.81□□□□□ -0.36
UBE3B-210ENST00000539599 IKZF2Q9UKS7 526 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 SPAG17Q6Q759 2223 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 PRAMEF26H0Y7S4 382 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 SSNA1O43805 119 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 PRAMEF2O60811 474 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 DHFRP00374 187 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 ENPP1P22413 925 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 KLF9Q13886 244 aaPredicted RBP12.81□□□□□ -0.36
UBE3B-210ENST00000539599 GRM7Q14831 915 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 DEFB133Q30KQ1 61 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 LIPNQ5VXI9 398 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 SHISA6Q6ZSJ9 500 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 CDCA3Q99618 268 aaPredicted RBP12.81□□□□□ -0.36
UBE3B-210ENST00000539599 NPFFR2Q9Y5X5 522 aa12.81□□□□□ -0.36
UBE3B-210ENST00000539599 TRAV8-7A0A075B6U6 113 aa12.8□□□□□ -0.36
UBE3B-210ENST00000539599 KIR2DS5A0A0G2JLQ3 304 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms