RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 STARD5Q9NSY2 213 aa18.58■□□□□ 0.56
TMEM260-203ENST00000539559 CREBL2O60519 120 aaPredicted RBP18.57■□□□□ 0.56
TMEM260-203ENST00000539559 PRAF2O60831 178 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 GJA4P35212 333 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 CBFBQ13951 182 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 CSRP2Q16527 193 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 C2orf27AQ580R0 203 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 YOD1Q5VVQ6 348 aaPredicted RBP18.57■□□□□ 0.56
TMEM260-203ENST00000539559 ARSKQ6UWY0 536 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 USP53Q70EK8 1073 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 V9GY05 133 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 ARID1BQ8NFD5 2236 aaPredicted RBP18.57■□□□□ 0.56
TMEM260-203ENST00000539559 ANKRD20A5PA0PJZ0 165 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 BRINP1O60477 761 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 OR8G3PP0DMU2 310 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 IFNGR1P15260 489 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 TLX1P31314 330 aaPredicted RBP18.57■□□□□ 0.56
TMEM260-203ENST00000539559 RPS27P42677 84 aaKnown RBP18.57■□□□□ 0.56
TMEM260-203ENST00000539559 ACAA2P42765 397 aaKnown RBP18.57■□□□□ 0.56
TMEM260-203ENST00000539559 H2BFSP57053 126 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 RGS7BPQ6MZT1 257 aaPredicted RBP18.57■□□□□ 0.56
TMEM260-203ENST00000539559 KIRREL2Q6UWL6 708 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 SYS1Q8N2H4 156 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 LHFPL5Q8TAF8 219 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 ZDHHC1Q8WTX9 485 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 PLEKHA1Q9HB21 404 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 KIF25Q9UIL4 384 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 SLC22A7Q9Y694 548 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 OR2M5A3KFT3 312 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 H0YC42 278 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 CTRB1P17538 263 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 ADRA2CP18825 462 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 ZP3P21754 424 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 IGFALSP35858 605 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 SGCGQ13326 291 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 CTRB2Q6GPI1 263 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 ZNF613Q6PF04 617 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 UNQ9370/PRO34162Q6UXP9 181 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 TMEM184AQ6ZMB5 413 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 OR6V1Q8N148 313 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 CDRT4Q8N9R6 151 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 MRPL38Q96DV4 380 aaKnown RBP18.57■□□□□ 0.56
TMEM260-203ENST00000539559 S100A16Q96FQ6 103 aaKnown RBP18.57■□□□□ 0.56
TMEM260-203ENST00000539559 TOE1Q96GM8 510 aaKnown RBP18.57■□□□□ 0.56
TMEM260-203ENST00000539559 Q96M85 177 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 ARL6Q9H0F7 186 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 KCNK15Q9H427 330 aa18.57■□□□□ 0.56
TMEM260-203ENST00000539559 HEATR5AQ86XA9 2040 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 SLC22A23A1A5C7 686 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 ANXA2P2A6NMY6 339 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 PRKNO60260 465 aaPredicted RBP18.56■□□□□ 0.56
TMEM260-203ENST00000539559 GALR3O60755 368 aaPredicted RBP18.56■□□□□ 0.56
TMEM260-203ENST00000539559 ECDO95905 644 aaPredicted RBP18.56■□□□□ 0.56
TMEM260-203ENST00000539559 IGKV1D-16P01601 117 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 RLN1P04808 185 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 TYRP1P17643 537 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 RAB30Q15771 203 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 DCAF12L2Q5VW00 463 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 ZNF626Q68DY1 528 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 OR14C36Q8NHC7 312 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 LCORQ96JN0 433 aaPredicted RBP18.56■□□□□ 0.56
TMEM260-203ENST00000539559 OR2A5Q96R48 311 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 TAS2R5Q9NYW4 299 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 DENND4AQ7Z401 1863 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 MPDZO75970 2070 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 CACNA1IQ9P0X4 2223 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 SPEGQ15772 3267 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 A0A1W2PQU0 124 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 SMAD9O15198 467 aaKnown RBP18.56■□□□□ 0.56
TMEM260-203ENST00000539559 LINC01565O15544 149 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 MAS1P04201 325 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 ZNF35P13682 527 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 SPI1P17947 270 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 RPS15AP62244 130 aaKnown RBP18.56■□□□□ 0.56
TMEM260-203ENST00000539559 OR7E24Q6IFN5 339 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 IQCF2Q8IXL9 164 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 OR14A16Q8NHC5 309 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 SERINC2Q96SA4 455 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 SRMSQ9H3Y6 488 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 DUSP22Q9NRW4 184 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 SERTAD3Q9UJW9 196 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 ING1Q9UK53 422 aaPredicted RBP18.56■□□□□ 0.56
TMEM260-203ENST00000539559 FBXL2Q9UKC9 423 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 KLHDC2Q9Y2U9 406 aa18.56■□□□□ 0.56
TMEM260-203ENST00000539559 NDUFB2O95178 105 aa18.55■□□□□ 0.56
TMEM260-203ENST00000539559 KAT7O95251 611 aa18.55■□□□□ 0.56
TMEM260-203ENST00000539559 GIPP09681 153 aaPredicted RBP18.55■□□□□ 0.56
TMEM260-203ENST00000539559 ICAM2P13598 275 aa18.55■□□□□ 0.56
TMEM260-203ENST00000539559 ITPKBP27987 946 aa18.55■□□□□ 0.56
TMEM260-203ENST00000539559 TAS2R20P59543 309 aa18.55■□□□□ 0.56
TMEM260-203ENST00000539559 GUCA2AQ02747 115 aa18.55■□□□□ 0.56
TMEM260-203ENST00000539559 ELFN2Q5R3F8 820 aa18.55■□□□□ 0.56
TMEM260-203ENST00000539559 HDDC2Q7Z4H3 204 aa18.55■□□□□ 0.56
TMEM260-203ENST00000539559 NPEPL1Q8NDH3 523 aa18.55■□□□□ 0.56
TMEM260-203ENST00000539559 OR52R1Q8NGF1 315 aa18.55■□□□□ 0.56
TMEM260-203ENST00000539559 RNF166Q96A37 237 aaPredicted RBP18.55■□□□□ 0.56
TMEM260-203ENST00000539559 DNAJA3Q96EY1 480 aa18.55■□□□□ 0.56
TMEM260-203ENST00000539559 PLA2G2FQ9BZM2 168 aa18.55■□□□□ 0.56
TMEM260-203ENST00000539559 THAP10Q9P2Z0 257 aaPredicted RBP18.55■□□□□ 0.56
TMEM260-203ENST00000539559 ZNF281Q9Y2X9 895 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms