RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 A0A1B0GVT2 93 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 A0A1W2PQL4 384 aaPredicted RBP5.06□□□□□ -1.6
PCF11-205ENST00000530906 NPIPB13A6NJU9 1138 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 B8ZZF3 427 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 NPIPB4C9JG80 1138 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 HRKO00198 91 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 CTDSP2O14595 271 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 OGG1O15527 345 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 OR2T1O43869 369 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 TSPAN2O60636 221 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 RFPL3O75679 317 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 CDC123O75794 336 aaPredicted RBP5.06□□□□□ -1.6
PCF11-205ENST00000530906 SC5DO75845 299 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 TPPPO94811 219 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 ZNF432O94892 652 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 GLCEO94923 617 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 SLC2A10O95528 541 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 PPP1R3DO95685 299 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 HIST1H2ABP04908 130 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 TACSTD2P09758 323 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 ASAH2BP0C7U1 165 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 TRAPPC2P0DI81 140 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 TRAPPC2BP0DI82 140 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 SDHAP31040 664 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 UQCRC1P31930 480 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 CSF2RBP32927 897 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 RPL4P36578 427 aaKnown RBP5.06□□□□□ -1.6
PCF11-205ENST00000530906 TALDO1P37837 337 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 RANBP1P43487 201 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 RPS5P46782 204 aaKnown RBP5.06□□□□□ -1.6
PCF11-205ENST00000530906 TMED10P49755 219 aaKnown RBP5.06□□□□□ -1.6
PCF11-205ENST00000530906 DUSP3P51452 185 aaPredicted RBP5.06□□□□□ -1.6
PCF11-205ENST00000530906 DLX5P56178 289 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 OR1D5P58170 312 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 SLC26A5P58743 744 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 LINC00310P59036 64 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 PLCXD2Q0VAA5 305 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 TRA2AQ13595 282 aaKnown RBP eCLIP5.06□□□□□ -1.6
PCF11-205ENST00000530906 CBFBQ13951 182 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 ZNF74Q16587 644 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 ZNF791Q3KP31 576 aaPredicted RBP5.06□□□□□ -1.6
PCF11-205ENST00000530906 GLYR1Q49A26 553 aaPredicted RBP5.06□□□□□ -1.6
PCF11-205ENST00000530906 CDONQ4KMG0 1287 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 KLHL12Q53G59 568 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 SOWAHCQ53LP3 525 aaPredicted RBP5.06□□□□□ -1.6
PCF11-205ENST00000530906 SNAP47Q5SQN1 464 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 SLC35F1Q5T1Q4 408 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 FAM205BPQ63HN1 556 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 DMKNQ6E0U4 476 aaPredicted RBP5.06□□□□□ -1.6
PCF11-205ENST00000530906 RPL22L1Q6P5R6 122 aaKnown RBP5.06□□□□□ -1.6
PCF11-205ENST00000530906 HIST3H2AQ7L7L0 130 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 MAMDC2Q7Z304 686 aaPredicted RBP5.06□□□□□ -1.6
PCF11-205ENST00000530906 KANSL1Q7Z3B3 1105 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 NANOGNBQ7Z5D8 188 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 PXKQ7Z7A4 578 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 JAZF1Q86VZ6 243 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 LRRC28Q86X40 367 aaPredicted RBP5.06□□□□□ -1.6
PCF11-205ENST00000530906 MARCH9Q86YJ5 346 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 KLBQ86Z14 1044 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 SLC25A45Q8N413 288 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 BBS1Q8NFJ9 593 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 OR10H4Q8NGA5 316 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 OR4N2Q8NGD1 307 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 OR52E2Q8NGJ4 325 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 OR5L2Q8NGL0 311 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 OR5M3Q8NGP4 307 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 OR2T4Q8NH00 348 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 OR5W2Q8NH69 310 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 PHOSPHO1Q8TCT1 267 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 RPS4Y2Q8TD47 263 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 ASB15Q8WXK1 588 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 TMEM234Q8WY98 164 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 ST8SIA1Q92185 356 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 SMPDL3BQ92485 455 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 HIST1H2ACQ93077 130 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 SMIM19Q96E16 107 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 TRMT61AQ96FX7 289 aaKnown RBP5.06□□□□□ -1.6
PCF11-205ENST00000530906 DIRAS2Q96HU8 199 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 TXNDC15Q96J42 360 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 TNFRSF13CQ96RJ3 184 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 NEURL2Q9BR09 285 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 TBL1XR1Q9BZK7 514 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 SEMA4CQ9C0C4 833 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 OR8D2Q9GZM6 311 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 VN1R1Q9GZP7 353 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 SRRQ9GZT4 340 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 WWTR1Q9GZV5 400 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 SLC22A4Q9H015 551 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 RNF32Q9H0A6 362 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 SLC26A1Q9H2B4 701 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 RNF167Q9H6Y7 350 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 CAPN10Q9HC96 672 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 NANSQ9NR45 359 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 PNO1Q9NRX1 252 aaKnown RBP5.06□□□□□ -1.6
PCF11-205ENST00000530906 UCKL1Q9NWZ5 548 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 RHBDL2Q9NX52 303 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 C19orf25Q9UFG5 118 aaPredicted RBP5.06□□□□□ -1.6
PCF11-205ENST00000530906 IL20RAQ9UHF4 553 aa5.06□□□□□ -1.6
PCF11-205ENST00000530906 TMEM184BQ9Y519 407 aaPredicted RBP5.06□□□□□ -1.6
PCF11-205ENST00000530906 V9GYH0 126 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms