RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 VSTM5A8MXK1 200 aa19.49■□□□□ 0.71
TRAPPC4-208ENST00000527680 NPIPB7O75200 414 aa19.49■□□□□ 0.71
TRAPPC4-208ENST00000527680 PNMTP11086 282 aa19.49■□□□□ 0.71
TRAPPC4-208ENST00000527680 GTF2H4Q92759 462 aa19.49■□□□□ 0.71
TRAPPC4-208ENST00000527680 KTI12Q96EK9 354 aaPredicted RBP19.49■□□□□ 0.71
TRAPPC4-208ENST00000527680 PIMREGQ9BSJ6 248 aa19.49■□□□□ 0.71
TRAPPC4-208ENST00000527680 KATNB1Q9BVA0 655 aa19.49■□□□□ 0.71
TRAPPC4-208ENST00000527680 TMEM229AB2RXF0 380 aa19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 LMX1BO60663 402 aa19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 OR4A8P0C604 315 aa19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 IGHV4-31P0DP07 118 aa19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 GZMKP49863 264 aa19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 SLC18A1P54219 525 aa19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 STX1BP61266 288 aa19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 NAAAQ02083 359 aa19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 IQCCQ4KMZ1 466 aa19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 SLC2A7Q6PXP3 512 aa19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 LINGO2Q7L985 606 aa19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 MAVSQ7Z434 540 aa19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 GPR137CQ8N3F9 429 aa19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 ANKS4BQ8N8V4 417 aa19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 BBS10Q8TAM1 723 aa19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 RNF217Q8TC41 542 aa19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 OXGR1Q96P68 337 aa19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 SORCS2Q96PQ0 1159 aa19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 ZNF317Q96PQ6 595 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 LINC00470Q9BZP3 86 aa19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 BCL2L10Q9HD36 194 aa19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 A4GALTQ9NPC4 353 aa19.48■□□□□ 0.71
TRAPPC4-208ENST00000527680 B9A039 149 aa19.47■□□□□ 0.71
TRAPPC4-208ENST00000527680 OR2T1O43869 369 aa19.47■□□□□ 0.71
TRAPPC4-208ENST00000527680 SLC43A1O75387 559 aa19.47■□□□□ 0.71
TRAPPC4-208ENST00000527680 HOXB1P14653 301 aaPredicted RBP19.47■□□□□ 0.71
TRAPPC4-208ENST00000527680 ZNF16P17020 682 aaPredicted RBP19.47■□□□□ 0.71
TRAPPC4-208ENST00000527680 SH3BGRP55822 239 aaPredicted RBP19.47■□□□□ 0.71
TRAPPC4-208ENST00000527680 ARF1P84077 181 aaKnown RBP19.47■□□□□ 0.71
TRAPPC4-208ENST00000527680 EGR4Q05215 589 aa19.47■□□□□ 0.71
TRAPPC4-208ENST00000527680 FADDQ13158 208 aa19.47■□□□□ 0.71
TRAPPC4-208ENST00000527680 PHC2Q8IXK0 858 aa19.47■□□□□ 0.71
TRAPPC4-208ENST00000527680 GOLGA6L1Q8N7Z2 621 aa19.47■□□□□ 0.71
TRAPPC4-208ENST00000527680 MAGEE2Q8TD90 523 aaPredicted RBP19.47■□□□□ 0.71
TRAPPC4-208ENST00000527680 FOXN4Q96NZ1 517 aa19.47■□□□□ 0.71
TRAPPC4-208ENST00000527680 PAIP1Q9H074 479 aaKnown RBP19.47■□□□□ 0.71
TRAPPC4-208ENST00000527680 MOV10Q9HCE1 1003 aaKnown RBP19.47■□□□□ 0.71
TRAPPC4-208ENST00000527680 TMEM160Q9NX00 188 aa19.47■□□□□ 0.71
TRAPPC4-208ENST00000527680 LPAR3Q9UBY5 353 aa19.47■□□□□ 0.71
TRAPPC4-208ENST00000527680 ARPC4-TTLL3A0A0A6YYG9 625 aa19.46■□□□□ 0.71
TRAPPC4-208ENST00000527680 FTCDNL1E5RQL4 147 aa19.46■□□□□ 0.71
TRAPPC4-208ENST00000527680 NDUFS8O00217 210 aa19.46■□□□□ 0.71
TRAPPC4-208ENST00000527680 PHF1O43189 567 aaPredicted RBP19.46■□□□□ 0.71
TRAPPC4-208ENST00000527680 CECR9P0C854 216 aa19.46■□□□□ 0.71
TRAPPC4-208ENST00000527680 CBLP22681 906 aa19.46■□□□□ 0.71
TRAPPC4-208ENST00000527680 CAPZA2P47755 286 aa19.46■□□□□ 0.71
TRAPPC4-208ENST00000527680 OR4F15Q8NGB8 312 aa19.46■□□□□ 0.71
TRAPPC4-208ENST00000527680 TAAR8Q969N4 342 aa19.46■□□□□ 0.71
TRAPPC4-208ENST00000527680 SLC35B4Q969S0 331 aa19.46■□□□□ 0.71
TRAPPC4-208ENST00000527680 PTDSS2Q9BVG9 487 aa19.46■□□□□ 0.71
TRAPPC4-208ENST00000527680 RAB1BQ9H0U4 201 aa19.46■□□□□ 0.71
TRAPPC4-208ENST00000527680 SELENONQ9NZV5 590 aa19.46■□□□□ 0.71
TRAPPC4-208ENST00000527680 SEC14L4Q9UDX3 406 aa19.46■□□□□ 0.71
TRAPPC4-208ENST00000527680 USH1CQ9Y6N9 552 aa19.46■□□□□ 0.71
TRAPPC4-208ENST00000527680 LOC100289279A0A1B0GTE1 492 aa19.45■□□□□ 0.7
TRAPPC4-208ENST00000527680 LOC390937A0A1W2PQ73 354 aa19.45■□□□□ 0.7
TRAPPC4-208ENST00000527680 AIM2O14862 343 aa19.45■□□□□ 0.7
TRAPPC4-208ENST00000527680 APEHP13798 732 aaKnown RBP19.45■□□□□ 0.7
TRAPPC4-208ENST00000527680 ETS2P15036 469 aa19.45■□□□□ 0.7
TRAPPC4-208ENST00000527680 NR4A2P43354 598 aa19.45■□□□□ 0.7
TRAPPC4-208ENST00000527680 ADIPOQQ15848 244 aa19.45■□□□□ 0.7
TRAPPC4-208ENST00000527680 NET1Q7Z628 596 aaPredicted RBP19.45■□□□□ 0.7
TRAPPC4-208ENST00000527680 KRT73Q86Y46 540 aa19.45■□□□□ 0.7
TRAPPC4-208ENST00000527680 ARIH2OSQ8N7S6 290 aa19.45■□□□□ 0.7
TRAPPC4-208ENST00000527680 NFKBIDQ8NI38 313 aa19.45■□□□□ 0.7
TRAPPC4-208ENST00000527680 SLC38A4Q969I6 547 aa19.45■□□□□ 0.7
TRAPPC4-208ENST00000527680 CHODLQ9H9P2 273 aa19.45■□□□□ 0.7
TRAPPC4-208ENST00000527680 GPR35Q9HC97 309 aa19.45■□□□□ 0.7
TRAPPC4-208ENST00000527680 CRNNQ9UBG3 495 aaPredicted RBP19.45■□□□□ 0.7
TRAPPC4-208ENST00000527680 KCNS2Q9ULS6 477 aa19.45■□□□□ 0.7
TRAPPC4-208ENST00000527680 RCE1Q9Y256 329 aa19.45■□□□□ 0.7
TRAPPC4-208ENST00000527680 MXRA5Q9NR99 2828 aa19.45■□□□□ 0.7
TRAPPC4-208ENST00000527680 MALRD1Q5VYJ5 2156 aa19.44■□□□□ 0.7
TRAPPC4-208ENST00000527680 M0R082 166 aa19.44■□□□□ 0.7
TRAPPC4-208ENST00000527680 CBR1P16152 277 aa19.44■□□□□ 0.7
TRAPPC4-208ENST00000527680 GRPRP30550 384 aa19.44■□□□□ 0.7
TRAPPC4-208ENST00000527680 CALCRP30988 508 aa19.44■□□□□ 0.7
TRAPPC4-208ENST00000527680 IDH3GP51553 393 aaPredicted RBP19.44■□□□□ 0.7
TRAPPC4-208ENST00000527680 NPRL3Q12980 569 aa19.44■□□□□ 0.7
TRAPPC4-208ENST00000527680 CEACAM16Q2WEN9 425 aa19.44■□□□□ 0.7
TRAPPC4-208ENST00000527680 C3orf36Q3SXR2 165 aa19.44■□□□□ 0.7
TRAPPC4-208ENST00000527680 ALG10BQ5I7T1 473 aa19.44■□□□□ 0.7
TRAPPC4-208ENST00000527680 GCNT6Q5T4J0 391 aa19.44■□□□□ 0.7
TRAPPC4-208ENST00000527680 FAM69AQ5T7M9 428 aa19.44■□□□□ 0.7
TRAPPC4-208ENST00000527680 FAM166AQ6J272 317 aa19.44■□□□□ 0.7
TRAPPC4-208ENST00000527680 EPGNQ6UW88 154 aa19.44■□□□□ 0.7
TRAPPC4-208ENST00000527680 C5orf46Q6UWT4 87 aa19.44■□□□□ 0.7
TRAPPC4-208ENST00000527680 H1FNTQ75WM6 255 aaPredicted RBP19.44■□□□□ 0.7
TRAPPC4-208ENST00000527680 ZNF540Q8NDQ6 660 aa19.44■□□□□ 0.7
TRAPPC4-208ENST00000527680 ANKK1Q8NFD2 765 aa19.44■□□□□ 0.7
TRAPPC4-208ENST00000527680 ZNF417Q8TAU3 575 aa19.44■□□□□ 0.7
TRAPPC4-208ENST00000527680 DNAJA4Q8WW22 397 aaPredicted RBP19.44■□□□□ 0.7
TRAPPC4-208ENST00000527680 ZNF587Q96SQ5 575 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms