RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 LIN7BQ9HAP6 207 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 IL21RQ9HBE5 538 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 NANSQ9NR45 359 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 KIF25Q9UIL4 384 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 A0A1B0GVT2 93 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 A0A1B0GWA3 101 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 PRSS47A8MTI9 375 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 FAM171A2A8MVW0 826 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 NUPL2O15504 423 aaKnown RBP11.47□□□□□ -0.57
CAPN1-208ENST00000527323 ARPC5O15511 151 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 B3GALT2O43825 422 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 PRICKLE3O43900 615 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-208ENST00000527323 RPP14O95059 124 aaKnown RBP11.47□□□□□ -0.57
CAPN1-208ENST00000527323 DCTDP32321 178 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 RPS11P62280 158 aaKnown RBP eCLIP11.47□□□□□ -0.57
CAPN1-208ENST00000527323 LGALS3BPQ08380 585 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 TUSC1Q2TAM9 212 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 LINC00303Q3SY05 128 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 ARSKQ6UWY0 536 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 WDR89Q96FK6 387 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-208ENST00000527323 ZNF559Q9BR84 538 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 GINS4Q9BRT9 223 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 ZCCHC4Q9H5U6 513 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 NPDC1Q9NQX5 325 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-208ENST00000527323 NCDNQ9UBB6 729 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 SEC16AO15027 2179 aa11.47□□□□□ -0.57
CAPN1-208ENST00000527323 GXYLT2A0PJZ3 443 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 ANKRD61A6NGH8 418 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 RLN1P04808 185 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 HOXD4P09016 255 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-208ENST00000527323 IFNGR1P15260 489 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 AK4P27144 223 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-208ENST00000527323 ALG10BQ5I7T1 473 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 TMEM81Q6P7N7 255 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 FAM199XQ6PEV8 388 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-208ENST00000527323 GLDNQ6ZMI3 551 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-208ENST00000527323 CXorf58Q96LI9 332 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 PHF7Q9BWX1 381 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-208ENST00000527323 GPR174Q9BXC1 333 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 LMAN1LQ9HAT1 526 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 MCCC2Q9HCC0 563 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 PFDN2Q9UHV9 154 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 C19orf53Q9UNZ5 99 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-208ENST00000527323 V9GY05 133 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 KIAA1549LQ6ZVL6 1849 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 ATP6V1G2-DDX39BF2Z307 99 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 LGALS8O00214 317 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 SELENOFO60613 162 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 SIX6O95475 246 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 SOX2P48431 317 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 RAP2BP61225 183 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 NHLRC3Q5JS37 347 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 ZNF425Q6IV72 752 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 NHLRC1Q6VVB1 395 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 ZNF761Q86XN6 746 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-208ENST00000527323 SYS1Q8N2H4 156 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 OR52B4Q8NGK2 314 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 OR6M1Q8NGM8 313 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 ARL6Q9H0F7 186 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 ZNF275Q9NSD4 429 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-208ENST00000527323 PIPOXQ9P0Z9 390 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 ADAM18Q9Y3Q7 739 aa11.46□□□□□ -0.57
CAPN1-208ENST00000527323 RIF1Q5UIP0 2472 aaKnown RBP11.46□□□□□ -0.57
CAPN1-208ENST00000527323 FXYD6-FXYD2A0A087WZ82 144 aa11.46□□□□□ -0.58
CAPN1-208ENST00000527323 PLSCR5A0PG75 271 aa11.46□□□□□ -0.58
CAPN1-208ENST00000527323 MCRIP1C9JLW8 97 aa11.46□□□□□ -0.58
CAPN1-208ENST00000527323 AIPO00170 330 aa11.46□□□□□ -0.58
CAPN1-208ENST00000527323 PIN1P1O15428 100 aa11.46□□□□□ -0.58
CAPN1-208ENST00000527323 FCER2P06734 321 aa11.46□□□□□ -0.58
CAPN1-208ENST00000527323 GIPP09681 153 aaPredicted RBP11.46□□□□□ -0.58
CAPN1-208ENST00000527323 RPS15AP62244 130 aaKnown RBP11.46□□□□□ -0.58
CAPN1-208ENST00000527323 NDUFAF6Q330K2 333 aa11.46□□□□□ -0.58
CAPN1-208ENST00000527323 CDRT4Q8N9R6 151 aa11.46□□□□□ -0.58
CAPN1-208ENST00000527323 LHFPL5Q8TAF8 219 aa11.46□□□□□ -0.58
CAPN1-208ENST00000527323 ST8SIA4Q92187 359 aa11.46□□□□□ -0.58
CAPN1-208ENST00000527323 SLC25A38Q96DW6 304 aa11.46□□□□□ -0.58
CAPN1-208ENST00000527323 MRPL48Q96GC5 212 aaKnown RBP11.46□□□□□ -0.58
CAPN1-208ENST00000527323 NMNAT3Q96T66 252 aa11.46□□□□□ -0.58
CAPN1-208ENST00000527323 TIMM29Q9BSF4 260 aa11.46□□□□□ -0.58
CAPN1-208ENST00000527323 FXYD6Q9H0Q3 95 aa11.46□□□□□ -0.58
CAPN1-208ENST00000527323 RSPH9Q9H1X1 276 aaPredicted RBP11.46□□□□□ -0.58
CAPN1-208ENST00000527323 TCF7L1Q9HCS4 588 aa11.46□□□□□ -0.58
CAPN1-208ENST00000527323 OBP2AQ9NY56 170 aa11.46□□□□□ -0.58
CAPN1-208ENST00000527323 FLRT3Q9NZU0 649 aa11.46□□□□□ -0.58
CAPN1-208ENST00000527323 NTMQ9P121 344 aa11.46□□□□□ -0.58
CAPN1-208ENST00000527323 COPS3Q9UNS2 423 aa11.46□□□□□ -0.58
CAPN1-208ENST00000527323 COLEC10Q9Y6Z7 277 aa11.46□□□□□ -0.58
CAPN1-208ENST00000527323 UBE2QL1A1L167 161 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 IFNA16P05015 189 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 CEACAM5P06731 702 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 TYRP1P17643 537 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 TPMTP51580 245 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 ADPRHP54922 357 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 GXYLT1Q4G148 440 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 FAM122CQ6P4D5 195 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 ZNF613Q6PF04 617 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 NUDT18Q6ZVK8 323 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 ZAR1Q86SH2 424 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 POMGNT2Q8NAT1 580 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 PMEPA1Q969W9 287 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms