RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 CARTPTQ16568 116 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 ANKRD16Q6P6B7 361 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 SLC2A7Q6PXP3 512 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 SLC46A3Q7Z3Q1 461 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 BBS10Q8TAM1 723 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 SORCS2Q96PQ0 1159 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 ZNF317Q96PQ6 595 aaPredicted RBP13.21□□□□□ -0.29
CSMD1-207ENST00000520451 LINC00470Q9BZP3 86 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 PAIP1Q9H074 479 aaKnown RBP13.21□□□□□ -0.29
CSMD1-207ENST00000520451 BCL2L10Q9HD36 194 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 CA10Q9NS85 328 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 RPS6KB2Q9UBS0 482 aa13.21□□□□□ -0.29
CSMD1-207ENST00000520451 CECR9P0C854 216 aa13.2□□□□□ -0.3
CSMD1-207ENST00000520451 ZNF43P17038 809 aa13.2□□□□□ -0.3
CSMD1-207ENST00000520451 PAX7P23759 505 aa13.2□□□□□ -0.3
CSMD1-207ENST00000520451 SH3BGRP55822 239 aaPredicted RBP13.2□□□□□ -0.3
CSMD1-207ENST00000520451 LSM11P83369 360 aaKnown RBP eCLIP13.2□□□□□ -0.3
CSMD1-207ENST00000520451 NAAAQ02083 359 aa13.2□□□□□ -0.3
CSMD1-207ENST00000520451 EGR4Q05215 589 aa13.2□□□□□ -0.3
CSMD1-207ENST00000520451 FADDQ13158 208 aa13.2□□□□□ -0.3
CSMD1-207ENST00000520451 GGTLC2Q14390 218 aa13.2□□□□□ -0.3
CSMD1-207ENST00000520451 VHLLQ6RSH7 139 aa13.2□□□□□ -0.3
CSMD1-207ENST00000520451 PHC2Q8IXK0 858 aa13.2□□□□□ -0.3
CSMD1-207ENST00000520451 ANKS4BQ8N8V4 417 aa13.2□□□□□ -0.3
CSMD1-207ENST00000520451 MAGEE2Q8TD90 523 aaPredicted RBP13.2□□□□□ -0.3
CSMD1-207ENST00000520451 TMEM158Q8WZ71 300 aa13.2□□□□□ -0.3
CSMD1-207ENST00000520451 SLC35B4Q969S0 331 aa13.2□□□□□ -0.3
CSMD1-207ENST00000520451 KTI12Q96EK9 354 aaPredicted RBP13.2□□□□□ -0.3
CSMD1-207ENST00000520451 VRK1Q99986 396 aaPredicted RBP13.2□□□□□ -0.3
CSMD1-207ENST00000520451 PIMREGQ9BSJ6 248 aa13.2□□□□□ -0.3
CSMD1-207ENST00000520451 BEX2Q9BXY8 128 aa13.2□□□□□ -0.3
CSMD1-207ENST00000520451 NELFAQ9H3P2 528 aa13.2□□□□□ -0.3
CSMD1-207ENST00000520451 SEC61A2Q9H9S3 476 aa13.2□□□□□ -0.3
CSMD1-207ENST00000520451 TMEM160Q9NX00 188 aa13.2□□□□□ -0.3
CSMD1-207ENST00000520451 CRNNQ9UBG3 495 aaPredicted RBP13.2□□□□□ -0.3
CSMD1-207ENST00000520451 SEC14L4Q9UDX3 406 aa13.2□□□□□ -0.3
CSMD1-207ENST00000520451 RCE1Q9Y256 329 aa13.2□□□□□ -0.3
CSMD1-207ENST00000520451 USH1CQ9Y6N9 552 aa13.2□□□□□ -0.3
CSMD1-207ENST00000520451 ZNF500O60304 480 aaPredicted RBP13.19□□□□□ -0.3
CSMD1-207ENST00000520451 SLC43A1O75387 559 aa13.19□□□□□ -0.3
CSMD1-207ENST00000520451 OR4A8P0C604 315 aa13.19□□□□□ -0.3
CSMD1-207ENST00000520451 BMP2P12643 396 aa13.19□□□□□ -0.3
CSMD1-207ENST00000520451 GZMKP49863 264 aa13.19□□□□□ -0.3
CSMD1-207ENST00000520451 STX1BP61266 288 aa13.19□□□□□ -0.3
CSMD1-207ENST00000520451 ARF1P84077 181 aaKnown RBP13.19□□□□□ -0.3
CSMD1-207ENST00000520451 IL1RL1Q01638 556 aa13.19□□□□□ -0.3
CSMD1-207ENST00000520451 C1DQ13901 141 aaKnown RBP13.19□□□□□ -0.3
CSMD1-207ENST00000520451 ADIPOQQ15848 244 aa13.19□□□□□ -0.3
CSMD1-207ENST00000520451 C3orf36Q3SXR2 165 aa13.19□□□□□ -0.3
CSMD1-207ENST00000520451 C6orf89Q6UWU4 347 aa13.19□□□□□ -0.3
CSMD1-207ENST00000520451 GOLGA6L1Q8N7Z2 621 aa13.19□□□□□ -0.3
CSMD1-207ENST00000520451 TLCD1Q96CP7 247 aa13.19□□□□□ -0.3
CSMD1-207ENST00000520451 OXGR1Q96P68 337 aa13.19□□□□□ -0.3
CSMD1-207ENST00000520451 SHARPINQ9H0F6 387 aa13.19□□□□□ -0.3
CSMD1-207ENST00000520451 MOV10Q9HCE1 1003 aaKnown RBP13.19□□□□□ -0.3
CSMD1-207ENST00000520451 B3GAT1Q9P2W7 334 aa13.19□□□□□ -0.3
CSMD1-207ENST00000520451 LPAR3Q9UBY5 353 aa13.19□□□□□ -0.3
CSMD1-207ENST00000520451 ARFGEF3Q5TH69 2177 aa13.19□□□□□ -0.3
CSMD1-207ENST00000520451 A0A1B0GWA3 101 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 VWC2LB2RUY7 222 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 B9A039 149 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 RPL36A-HNRNPH2H7BZ11 118 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 M0R082 166 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 NDUFS8O00217 210 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 AIM2O14862 343 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 PHF1O43189 567 aaPredicted RBP13.18□□□□□ -0.3
CSMD1-207ENST00000520451 PDE5AO76074 875 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 ZNF432O94892 652 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 IGLV1-44P01699 117 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 HOXB1P14653 301 aaPredicted RBP13.18□□□□□ -0.3
CSMD1-207ENST00000520451 ETS2P15036 469 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 HOXB9P17482 250 aaPredicted RBP13.18□□□□□ -0.3
CSMD1-207ENST00000520451 HTR2AP28223 471 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 CALCRP30988 508 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 PRKAR1BP31321 381 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 NR4A2P43354 598 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 GCNT6Q5T4J0 391 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 FAM69AQ5T7M9 428 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 EPGNQ6UW88 154 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 GPR137CQ8N3F9 429 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 OR4F15Q8NGB8 312 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 NFKBIDQ8NI38 313 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 ZNF417Q8TAU3 575 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 SLC38A4Q969I6 547 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 TAAR8Q969N4 342 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 ZNF587Q96SQ5 575 aaPredicted RBP13.18□□□□□ -0.3
CSMD1-207ENST00000520451 C12orf10Q9HB07 376 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 GPR35Q9HC97 309 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 SLC25A37Q9NYZ2 338 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 SVEP1Q4LDE5 3571 aa13.18□□□□□ -0.3
CSMD1-207ENST00000520451 LOC390937A0A1W2PQ73 354 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 POLR3GO15318 223 aaPredicted RBP13.17□□□□□ -0.3
CSMD1-207ENST00000520451 OR2T1O43869 369 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 LMX1BO60663 402 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 FZD7O75084 574 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 IGKV3-15P01624 115 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 CELA3BP08861 270 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 ARAFP10398 606 aa13.17□□□□□ -0.3
CSMD1-207ENST00000520451 APEHP13798 732 aaKnown RBP13.17□□□□□ -0.3
CSMD1-207ENST00000520451 CBLP22681 906 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms