RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 SRPX2O60687 465 aaPredicted RBP10.8□□□□□ -0.68
SYNPO-204ENST00000519664 OLFM2O95897 454 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 DCNP07585 359 aaKnown RBP10.8□□□□□ -0.68
SYNPO-204ENST00000519664 PSPHP78330 225 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 MESP2Q0VG99 397 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 EIF4EBP2Q13542 120 aaPredicted RBP10.8□□□□□ -0.68
SYNPO-204ENST00000519664 INSL4Q14641 139 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 HBMQ6B0K9 141 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 FAM109BQ6ICB4 259 aaPredicted RBP10.8□□□□□ -0.68
SYNPO-204ENST00000519664 ZNF793Q6ZN11 406 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 ABHD12BQ7Z5M8 362 aaPredicted RBP10.8□□□□□ -0.68
SYNPO-204ENST00000519664 RNF113BQ8IZP6 322 aaKnown RBP10.8□□□□□ -0.68
SYNPO-204ENST00000519664 GIMAP1Q8WWP7 306 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 SLC7A6Q92536 515 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 THRSPQ92748 146 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 ABI3Q9P2A4 366 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 RNF215Q9Y6U7 377 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 OR2T1O43869 369 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 SBK2P0C263 348 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 NPR2P20594 1047 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 TGM1P22735 817 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 RUNX2Q13950 521 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 BAK1Q16611 211 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 LCN10Q6JVE6 187 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 RDH10Q8IZV5 341 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 SLC22A8Q8TCC7 542 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 BRIX1Q8TDN6 353 aaKnown RBP10.8□□□□□ -0.68
SYNPO-204ENST00000519664 TOMM40LQ969M1 308 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 URM1Q9BTM9 101 aaKnown RBP10.8□□□□□ -0.68
SYNPO-204ENST00000519664 ST6GALNAC5Q9BVH7 336 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 HCAR1Q9BXC0 346 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 GABARAPL1Q9H0R8 117 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 LDAHQ9H6V9 325 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 FGF21Q9NSA1 209 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 ZNF281Q9Y2X9 895 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 ZNF850A8MQ14 1090 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 ACOT7O00154 380 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 OR10A3P58181 314 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 AGBL4Q5VU57 503 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 YOD1Q5VVQ6 348 aaPredicted RBP10.8□□□□□ -0.68
SYNPO-204ENST00000519664 ZNF620Q6ZNG0 422 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 SIAH3Q8IW03 269 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 UEVLDQ8IX04 471 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 LINC01555Q8NAE3 123 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 DNAAF1Q8NEP3 725 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 OR51D1Q8NGF3 324 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 ATOH1Q92858 354 aaPredicted RBP10.8□□□□□ -0.68
SYNPO-204ENST00000519664 MRGPRX3Q96LB0 322 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 ISG20L2Q9H9L3 353 aaKnown RBP10.8□□□□□ -0.68
SYNPO-204ENST00000519664 ING1Q9UK53 422 aaPredicted RBP10.8□□□□□ -0.68
SYNPO-204ENST00000519664 SBF2Q86WG5 1849 aa10.8□□□□□ -0.68
SYNPO-204ENST00000519664 PTPRFP10586 1907 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 TRDV1A0A1B0GX56 115 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 SLC35E2P0CK97 266 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 LTBQ06643 244 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 GPR50Q13585 617 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 FAM198BQ6UWH4 519 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 GPR32P1Q8NGA4 272 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 SLC25A46Q96AG3 418 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 MRGPRX1Q96LB2 322 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 LMF2Q9BU23 707 aaKnown RBP10.79□□□□□ -0.68
SYNPO-204ENST00000519664 MAN2C1Q9NTJ4 1040 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 PTTG3PQ9NZH4 202 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 RHBDD3Q9Y3P4 386 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 NBASA2RRP1 2371 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 ZNF705EA8MWA4 302 aaPredicted RBP10.79□□□□□ -0.68
SYNPO-204ENST00000519664 ZNF736B4DX44 427 aaPredicted RBP10.79□□□□□ -0.68
SYNPO-204ENST00000519664 RGS13O14921 159 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 CRTAPO75718 401 aaPredicted RBP10.79□□□□□ -0.68
SYNPO-204ENST00000519664 ELK1P19419 428 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 ACTBP60709 375 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 YPEL5P62699 121 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 ACTG1P63261 375 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 MRPS21P82921 87 aaKnown RBP10.79□□□□□ -0.68
SYNPO-204ENST00000519664 RPL22L1Q6P5R6 122 aaKnown RBP10.79□□□□□ -0.68
SYNPO-204ENST00000519664 COX15Q7KZN9 410 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 OR5D18Q8NGL1 313 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 ADAMTS14Q8WXS8 1223 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 DVL3Q92997 716 aaPredicted RBP10.79□□□□□ -0.68
SYNPO-204ENST00000519664 SLIRPQ9GZT3 109 aaKnown RBP10.79□□□□□ -0.68
SYNPO-204ENST00000519664 SLC6A14Q9UN76 642 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 CCL27Q9Y4X3 112 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 NUBP2Q9Y5Y2 271 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 EP400Q96L91 3159 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 SCN2AQ99250 2005 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 A0A1W2PS29 197 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 KRBOX1C9JBD0 128 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 SULT2B1O00204 365 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 HTR3BO95264 441 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 F10P00742 488 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 OR2T7P0C7T2 308 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 HOXC12P31275 282 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 VAMP2P63027 116 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 LSM11P83369 360 aaKnown RBP eCLIP10.79□□□□□ -0.68
SYNPO-204ENST00000519664 VWA2Q5GFL6 755 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 METTL11BQ5VVY1 283 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 MARCH3Q86UD3 253 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 ZNF595Q8IYB9 648 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 OR2T27Q8NH04 317 aa10.79□□□□□ -0.68
SYNPO-204ENST00000519664 ELP5Q8TE02 316 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms