RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 CBLN4Q9NTU7 201 aa7.51□□□□□ -1.21
PABPC1-202ENST00000517403 THAP1Q9NVV9 213 aa7.51□□□□□ -1.21
PABPC1-202ENST00000517403 EMC3Q9P0I2 261 aa7.51□□□□□ -1.21
PABPC1-202ENST00000517403 PCDHGB4Q9UN71 923 aa7.51□□□□□ -1.21
PABPC1-202ENST00000517403 TRAPPC4Q9Y296 219 aa7.51□□□□□ -1.21
PABPC1-202ENST00000517403 USH1CQ9Y6N9 552 aa7.51□□□□□ -1.21
PABPC1-202ENST00000517403 HEATR1Q9H583 2144 aaKnown RBP7.51□□□□□ -1.21
PABPC1-202ENST00000517403 A0A1B0GWA3 101 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 TMEM129A0AVI4 362 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 ELOA3DA6NLF2 546 aaPredicted RBP7.5□□□□□ -1.21
PABPC1-202ENST00000517403 FAM171A2A8MVW0 826 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 H7C417 338 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 TMCC2O75069 709 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 SLC22A3O75751 556 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 AGR2O95994 175 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 IGLV1-44P01699 117 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 DBIP07108 87 aaKnown RBP7.5□□□□□ -1.21
PABPC1-202ENST00000517403 IL7RP16871 459 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 CRATP43155 626 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 POLR2JP52435 117 aaKnown RBP7.5□□□□□ -1.21
PABPC1-202ENST00000517403 NUDT6P53370 316 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 SLC35A1P78382 337 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 HPCAP84074 193 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 ADIPOQQ15848 244 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 KRTAP24-1Q3LI83 254 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 ELOA3BQ3SY89 546 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 LIN52Q52LA3 116 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 TMEM255AQ5JRV8 349 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 LRIF1Q5T3J3 769 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 HHATQ5VTY9 493 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 C1orf140Q5VVS0 124 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 FOXB2Q5VYV0 432 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 ATG16L1Q676U5 607 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 NXNQ6DKJ4 435 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 EPGNQ6UW88 154 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 C6orf89Q6UWU4 347 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 AAED1Q7RTV5 226 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 PTOV1Q86YD1 416 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 HIPK1Q86Z02 1210 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 C1orf162Q8NEQ5 155 aaPredicted RBP7.5□□□□□ -1.21
PABPC1-202ENST00000517403 ELOA3Q8NG57 546 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 OIT3Q8WWZ8 545 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 TAAR8Q969N4 342 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 THOC1Q96FV9 657 aaKnown RBP7.5□□□□□ -1.21
PABPC1-202ENST00000517403 BOD1Q96IK1 185 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 CPPED1Q9BRF8 314 aaPredicted RBP7.5□□□□□ -1.21
PABPC1-202ENST00000517403 MTHFD2LQ9H903 347 aaPredicted RBP7.5□□□□□ -1.21
PABPC1-202ENST00000517403 A4GALTQ9NPC4 353 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 ZIM2Q9NZV7 527 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 KLHL14Q9P2G3 628 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 P2RX2Q9UBL9 471 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 USP22Q9UPT9 525 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 SLC9A8Q9Y2E8 581 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 ATP23Q9Y6H3 246 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 SVEP1Q4LDE5 3571 aa7.5□□□□□ -1.21
PABPC1-202ENST00000517403 M0R082 166 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 GPR171O14626 319 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 BGLAPP02818 100 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 OPN1SWP03999 348 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 ARAFP10398 606 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 IDO1P14902 403 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 PTAFRP25105 342 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 MPGP29372 298 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 AQP1P29972 269 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 MAGEA8P43361 318 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 MRPL19P49406 292 aaKnown RBP7.49□□□□□ -1.21
PABPC1-202ENST00000517403 CLK1P49759 484 aaKnown RBP7.49□□□□□ -1.21
PABPC1-202ENST00000517403 FABP6P51161 128 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 ARF1P84077 181 aaKnown RBP7.49□□□□□ -1.21
PABPC1-202ENST00000517403 NAAAQ02083 359 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 TM4SF20Q53R12 229 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 C6orf10Q5SRN2 563 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 NIPAL3Q6P499 406 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 TMEM108Q6UXF1 575 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 GPAT4Q86UL3 456 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 P2RY8Q86VZ1 359 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 CARM1Q86X55 608 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 THNSL2Q86YJ6 484 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 RBM45Q8IUH3 476 aaKnown RBP7.49□□□□□ -1.21
PABPC1-202ENST00000517403 ZNF417Q8TAU3 575 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 DDIT4LQ96D03 193 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 MUCL1Q96DR8 90 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 TXNDC15Q96J42 360 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 HS6ST2Q96MM7 605 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 OR2M2Q96R28 347 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 ZNF587Q96SQ5 575 aaPredicted RBP7.49□□□□□ -1.21
PABPC1-202ENST00000517403 MYEF2Q9P2K5 600 aaKnown RBP7.49□□□□□ -1.21
PABPC1-202ENST00000517403 GMPR2Q9P2T1 348 aaKnown RBP7.49□□□□□ -1.21
PABPC1-202ENST00000517403 CRNNQ9UBG3 495 aaPredicted RBP7.49□□□□□ -1.21
PABPC1-202ENST00000517403 REV1Q9UBZ9 1251 aa7.49□□□□□ -1.21
PABPC1-202ENST00000517403 A8MVM7 634 aa7.48□□□□□ -1.21
PABPC1-202ENST00000517403 LYNX1G3V0Z9 82 aa7.48□□□□□ -1.21
PABPC1-202ENST00000517403 MS4A18H0YCH9 400 aa7.48□□□□□ -1.21
PABPC1-202ENST00000517403 M0R3H8 397 aa7.48□□□□□ -1.21
PABPC1-202ENST00000517403 CLIC1O00299 241 aa7.48□□□□□ -1.21
PABPC1-202ENST00000517403 WNT9BO14905 357 aa7.48□□□□□ -1.21
PABPC1-202ENST00000517403 UBDO15205 165 aa7.48□□□□□ -1.21
PABPC1-202ENST00000517403 IL6P05231 212 aa7.48□□□□□ -1.21
PABPC1-202ENST00000517403 GPIP06744 558 aa7.48□□□□□ -1.21
PABPC1-202ENST00000517403 GSTP1P09211 210 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms